RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 FAM98BQ52LJ0 330 aaKnown RBP5.94□□□□□ -1.46
COL17A1-205ENST00000480127 SPRNQ5BIV9 151 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 KLF17Q5JT82 389 aaPredicted RBP5.94□□□□□ -1.46
COL17A1-205ENST00000480127 PRAMEF6Q5VXH4 476 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 CD276Q5ZPR3 534 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 SFRP4Q6FHJ7 346 aaPredicted RBP5.94□□□□□ -1.46
COL17A1-205ENST00000480127 CFAP77Q6ZQR2 320 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 Q6ZR03 302 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 KCTD8Q6ZWB6 473 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 PGAM4Q8N0Y7 254 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 OR6V1Q8N148 313 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 OR51L1Q8NGJ5 315 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 OR9Q1Q8NGQ5 310 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 TEX47Q8TBZ9 253 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 RAB40AQ8WXH6 277 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 GPX7Q96SL4 187 aaPredicted RBP5.94□□□□□ -1.46
COL17A1-205ENST00000480127 TSSK6Q9BXA6 273 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 TRIM15Q9C019 465 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 REEP1Q9H902 201 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 MARCH7Q9H992 704 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF556Q9HAH1 456 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 BRD7Q9NPI1 651 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 C14orf119Q9NWQ9 140 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF446Q9NWS9 450 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 C1orf123Q9NWV4 160 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 DNAJC27Q9NZQ0 273 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 RNF7Q9UBF6 113 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 ABCD2Q9UBJ2 740 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 DNAJB11Q9UBS4 358 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 KCNG2Q9UJ96 466 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 B9D1Q9UPM9 204 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF281Q9Y2X9 895 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 ARL2BPQ9Y2Y0 163 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 FAM96BQ9Y3D0 163 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 INSIG2Q9Y5U4 225 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 LYVE1Q9Y5Y7 322 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 LHFPL6Q9Y693 200 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 CDH10Q9Y6N8 788 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 U3KQV3 271 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 IGLV1-36A0A0B4J1U3 117 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 IGHV2-70DA0A0C4DH43 119 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 ANXA2P2A6NMY6 339 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 CD300LBA8K4G0 201 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 IQCF6A8MYZ5 107 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 CLDN34H7C241 214 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 BHLHE40O14503 412 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 PHYHO14832 338 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 FAM20BO75063 409 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 E2F6O75461 281 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 SOX14O95416 240 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 TXNDC12O95881 172 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 PAHP00439 452 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 APOC1P02654 83 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 ACSM4P0C7M7 580 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 SLC2A1P11166 492 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 HSD17B1P14061 328 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF12P17014 697 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF26P17031 533 aaPredicted RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 MDKP21741 143 aaPredicted RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 CPT2P23786 658 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 RBMXP38159 391 aaKnown RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 FGF12P61328 243 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 RPS7P62081 194 aaKnown RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 SRSF4Q08170 494 aaKnown RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 TSPAN31Q12999 210 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 EIF2B1Q14232 305 aaKnown RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 GK2Q14410 553 aaPredicted RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 SLC9A3R2Q15599 337 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 SNCBQ16143 134 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 KCNMB1Q16558 191 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 FAM201AQ5SY85 155 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 HIST2H2BDQ6DRA6 164 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 SLC18B1Q6NT16 456 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 BRD3OSQ6XYD6 125 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF620Q6ZNG0 422 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 DCDC5Q6ZRR9 648 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 DCXRQ7Z4W1 244 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 TSEN54Q7Z6J9 526 aaKnown RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 DHFR2Q86XF0 187 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 ERI1Q8IV48 349 aaKnown RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 CMTM4Q8IZR5 234 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 PNLDC1Q8NA58 520 aaKnown RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 SPERTQ8NA61 448 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 AQP11Q8NBQ7 271 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 C19orf18Q8NEA5 215 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 SLC26A10Q8NG04 563 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 OR2T33Q8NG76 320 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 OR6N2Q8NGY6 317 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 OR2AE1Q8NHA4 323 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 FAM81AQ8TBF8 368 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 ST8SIA4Q92187 359 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 ERGIC1Q969X5 290 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 CCDC124Q96CT7 223 aaKnown RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 HIST1H2AAQ96QV6 131 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 TMEM246Q9BRR3 403 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 PAPOLGQ9BWT3 736 aaKnown RBP5.93□□□□□ -1.46
COL17A1-205ENST00000480127 OPA3Q9H6K4 179 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 EGLN3Q9H6Z9 239 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 GORASP2Q9H8Y8 452 aa5.93□□□□□ -1.46
COL17A1-205ENST00000480127 ONECUT1Q9UBC0 465 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms