RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 MFGE8Q08431 387 aaPredicted RBP12.91□□□□□ -0.34
COL20A1-206ENST00000479501 FUT7Q11130 342 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 C16orf47Q6ZP98 133 aaPredicted RBP12.91□□□□□ -0.34
COL20A1-206ENST00000479501 DEFB123Q8N688 67 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 CNEP1R1Q8N9A8 125 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 TM4SF19Q96DZ7 209 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 PARP12Q9H0J9 701 aaKnown RBP12.91□□□□□ -0.34
COL20A1-206ENST00000479501 TMEM231Q9H6L2 316 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 PMP2P02689 132 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 ACSM4P0C7M7 580 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 FOXK1P85037 733 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 CLINT1Q14677 625 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 FAM74A1Q5RGS3 127 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 GABRG1Q8N1C3 465 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 PRR18Q8N4B5 295 aa12.91□□□□□ -0.34
COL20A1-206ENST00000479501 THOC3Q96J01 351 aaKnown RBP12.91□□□□□ -0.34
COL20A1-206ENST00000479501 EXOSC3Q9NQT5 275 aaKnown RBP12.91□□□□□ -0.34
COL20A1-206ENST00000479501 SNRPGP15A8MWD9 76 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 TK1P04183 234 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 RAC2P15153 192 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 HTD2P86397 168 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 CLPPQ16740 277 aaPredicted RBP12.9□□□□□ -0.34
COL20A1-206ENST00000479501 TMEM41BQ5BJD5 291 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 LAIR1Q6GTX8 287 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 SDSLQ96GA7 329 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 ZCCHC4Q9H5U6 513 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 TAF9BQ9HBM6 251 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 GCM1Q9NP62 436 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 SBF1O95248 1867 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 OR2B8PP59922 312 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 ECH1Q13011 328 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 CDONQ4KMG0 1287 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 DND1Q8IYX4 353 aaKnown RBP12.9□□□□□ -0.34
COL20A1-206ENST00000479501 WFDC6Q9BQY6 131 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 SLC17A2O00624 439 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 FOXS1O43638 330 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 EFEMP2O95967 443 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 IGHV3-9P01782 118 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
COL20A1-206ENST00000479501 CDH26Q8IXH8 852 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 PBOV1Q9GZY1 135 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 MTCH2Q9Y6C9 303 aa12.9□□□□□ -0.34
COL20A1-206ENST00000479501 LRRC37A2A6NM11 1700 aa12.9□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF814B7Z6K7 855 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 SHISA8B8ZZ34 492 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 RGS11O94810 467 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 TPPPO94811 219 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 CT45A8P0DMV1 189 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 CT45A9P0DMV2 189 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 OR13C7P0DN81 318 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 TAS2R30P59541 319 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 TOMM34Q15785 309 aaPredicted RBP12.89□□□□□ -0.35
COL20A1-206ENST00000479501 CT45A2Q5DJT8 189 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 DMKNQ6E0U4 476 aaPredicted RBP12.89□□□□□ -0.35
COL20A1-206ENST00000479501 LAIR2Q6ISS4 152 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 C4orf45Q96LM5 186 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 GDF2Q9UK05 429 aaPredicted RBP12.89□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF587BE7ETH6 402 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 CD3DP04234 171 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 LIMS1P48059 325 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF85Q03923 595 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 TLE4Q04727 773 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 FUT5Q11128 374 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 NANPQ8TBE9 248 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 LIPHQ8WWY8 451 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 IL1F10Q8WWZ1 152 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 OIT3Q8WWZ8 545 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 C11orf40Q8WZ69 217 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 RAB39BQ96DA2 213 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 TSPAN32Q96QS1 320 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 BARHL1Q9BZE3 327 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 C12orf10Q9HB07 376 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 MRPS18AQ9NVS2 196 aaKnown RBP12.89□□□□□ -0.35
COL20A1-206ENST00000479501 LRP12Q9Y561 859 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 M0R135 149 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 XRCC3O43542 346 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 MYBPHQ13203 477 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 RAB31Q13636 194 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 WDR38Q5JTN6 314 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 NAXDQ8IW45 347 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 SEMA6DQ8NFY4 1073 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 ZNF799Q96GE5 643 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 ST6GAL2Q96JF0 529 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 PTDSS2Q9BVG9 487 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 PILRAQ9UKJ1 303 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 NYNRINQ9P2P1 1898 aaKnown RBP12.89□□□□□ -0.35
COL20A1-206ENST00000479501 A0A1W2PPV4 95 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 NUDT19A8MXV4 375 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 RHBDD2Q6NTF9 364 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 KCNIP4Q6PIL6 250 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 PSMF1Q92530 271 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 WDR89Q96FK6 387 aaPredicted RBP12.89□□□□□ -0.35
COL20A1-206ENST00000479501 IFT22Q9H7X7 185 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 CSAG2Q9Y5P2 127 aa12.89□□□□□ -0.35
COL20A1-206ENST00000479501 H7C1Q1 480 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 TO15178 435 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 GPANK1O95872 356 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 PSMB6P28072 239 aa12.88□□□□□ -0.35
COL20A1-206ENST00000479501 GCH1P30793 250 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms