RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 FAM118AQ9NWS6 357 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 WARS2Q9UGM6 360 aaKnown RBP5.88□□□□□ -1.47
BRCA1-215ENST00000478531 GTF2A1LQ9UNN4 478 aa5.88□□□□□ -1.47
BRCA1-215ENST00000478531 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.88□□□□□ -1.473e-7■■■■■ 37.1
BRCA1-215ENST00000478531 YLPM1P49750 1951 aaKnown RBP5.88□□□□□ -1.47
BRCA1-215ENST00000478531 PRR32B1ATL7 298 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 CDC14BO60729 498 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 LILRA1O75019 489 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 CLIC3O95833 236 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 IGHV1-46P01743 117 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 CSF3P09919 207 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 SBK2P0C263 348 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 RAC2P15153 192 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 NAT1P18440 290 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 ALOX5APP20292 161 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 KITLGP21583 273 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 TUBG1P23258 451 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 GNALP38405 381 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 IL5RAQ01344 420 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 ZNF92Q03936 586 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 TIGD6Q17RP2 521 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 PCGF3Q3KNV8 242 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 OGFRL1Q5TC84 451 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 KCTD18Q6PI47 426 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 PLEKHG7Q6ZR37 379 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 COLCA1Q6ZS62 124 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 ENTHD1Q8IYW4 607 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 OR2Z1Q8NG97 314 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 SPRYD4Q8WW59 207 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 TRUB1Q8WWH5 349 aaKnown RBP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 HAVCR1Q96D42 359 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 ELMOD3Q96FG2 381 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 PGAM5Q96HS1 289 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 RDH12Q96NR8 316 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 TMUB1Q9BVT8 246 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 MROQ9BYG7 248 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 VCXQ9H320 206 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 TUBG2Q9NRH3 451 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 CLN6Q9NWW5 311 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 TREM2Q9NZC2 230 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 TMEM14AQ9Y6G1 99 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 MXRA5Q9NR99 2828 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 HIVEP2P31629 2446 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 IGHV3-64DA0A0J9YX35 117 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 TMEM238LA0A1B0GVL6 79 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 GGT3PA6NGU5 568 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 E9PQ18 207 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 ZNF670-ZNF695F2Z2N8 137 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 DLGAP1O14490 977 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 MAGEB4O15481 346 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 APOC1P02654 83 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 LIPAP38571 399 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 MTNR1AP48039 350 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 DSCR9P59020 149 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 PSMA6P60900 246 aaKnown RBP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 SNRPGP62308 76 aaKnown RBP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 SLC34A1Q06495 639 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 POU4F2Q12837 409 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 HNRNPA0Q13151 305 aaKnown RBP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 ZNF322Q6U7Q0 402 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 Q6ZR03 302 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 DNM1P46Q6ZS02 220 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 SSX6Q7RTT6 188 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 COMMD2Q86X83 199 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 LURAP1LQ8IV03 231 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 PACRGLQ8N7B6 248 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 C10orf105Q8TEF2 133 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 UBASH3BQ8TF42 649 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 ASB17Q8WXJ9 295 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 RNFT2Q96EX2 444 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 REEP6Q96HR9 211 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 C18orf12Q96KH6 178 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 SMR3AQ99954 134 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 APOL4Q9BPW4 351 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 REG4Q9BYZ8 158 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 OR10A2Q9H208 303 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 RNPEPL1Q9HAU8 725 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 MYOZ1Q9NP98 299 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 CYSLTR2Q9NS75 346 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 HAO2Q9NYQ3 351 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 CGGBP1Q9UFW8 167 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-215ENST00000478531 ZDHHC8Q9ULC8 765 aa5.87□□□□□ -1.47
BRCA1-215ENST00000478531 IGHV1-69-2A0A0G2JMI3 117 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 TMEM269A0A1B0GVZ9 245 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 LOC390937A0A1W2PQ73 354 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 A0A1W2PQL4 384 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-215ENST00000478531 SNTNA6NMZ2 147 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 PHYHO14832 338 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 CASQ2O14958 399 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-215ENST00000478531 SLC16A6O15403 523 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 XRCC2O43543 280 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 MPZL2O60487 215 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 RPP14O95059 124 aaKnown RBP5.86□□□□□ -1.47
BRCA1-215ENST00000478531 HLA-DPB1P04440 258 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 INHBBP09529 407 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 SELEP16581 610 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 TNFSF4P23510 183 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 COL8A2P25067 703 aa5.86□□□□□ -1.47
BRCA1-215ENST00000478531 RBMXP38159 391 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms