RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 HNRNPA0Q13151 305 aaKnown RBP19.69■□□□□ 0.74
C9orf3-215ENST00000478473 MAB21L1Q13394 359 aa19.69■□□□□ 0.74
C9orf3-215ENST00000478473 LIPNQ5VXI9 398 aa19.69■□□□□ 0.74
C9orf3-215ENST00000478473 FAHD2BQ6P2I3 314 aaPredicted RBP19.69■□□□□ 0.74
C9orf3-215ENST00000478473 TIGD4Q8IY51 512 aa19.69■□□□□ 0.74
C9orf3-215ENST00000478473 MUC20Q8N307 709 aaPredicted RBP19.69■□□□□ 0.74
C9orf3-215ENST00000478473 IQCF1Q8N6M8 205 aa19.69■□□□□ 0.74
C9orf3-215ENST00000478473 Q8TCH9 128 aa19.69■□□□□ 0.74
C9orf3-215ENST00000478473 DNAJC9Q8WXX5 260 aa19.69■□□□□ 0.74
C9orf3-215ENST00000478473 FAHD2AQ96GK7 314 aa19.69■□□□□ 0.74
C9orf3-215ENST00000478473 TOR3AQ9H497 397 aa19.69■□□□□ 0.74
C9orf3-215ENST00000478473 OPA3Q9H6K4 179 aa19.69■□□□□ 0.74
C9orf3-215ENST00000478473 NOP16Q9Y3C1 178 aaKnown RBP19.69■□□□□ 0.74
C9orf3-215ENST00000478473 WNK2Q9Y3S1 2297 aa19.69■□□□□ 0.74
C9orf3-215ENST00000478473 FAM183AA6NL82 134 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 F5H5P2 479 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 HMGN1P05114 100 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 GRB2P62993 217 aaKnown RBP19.68■□□□□ 0.74
C9orf3-215ENST00000478473 ZNF92Q03936 586 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 SCGB2A2Q13296 93 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 GINS1Q14691 196 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 PRSS45Q7RTY3 260 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 MRPL21Q7Z2W9 205 aaKnown RBP19.68■□□□□ 0.74
C9orf3-215ENST00000478473 C1QL2Q7Z5L3 287 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 HS3ST5Q8IZT8 346 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 BHLHE23Q8NDY6 225 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 OR6K6Q8NGW6 343 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 RNF133Q8WVZ7 376 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 UTP4Q969X6 686 aaKnown RBP19.68■□□□□ 0.74
C9orf3-215ENST00000478473 COPS4Q9BT78 406 aa19.68■□□□□ 0.74
C9orf3-215ENST00000478473 C5orf63A6NC05 138 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 TCF21O43680 179 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 E2F6O75461 281 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 FSHBP01225 129 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 PAICSP22234 425 aaKnown RBP19.67■□□□□ 0.74
C9orf3-215ENST00000478473 ZFP36P26651 326 aaKnown RBP19.67■□□□□ 0.74
C9orf3-215ENST00000478473 GSTT1P30711 240 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 PMELP40967 661 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 SLC15A1P46059 708 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 GLYATL3Q5SZD4 288 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 DCAF12L2Q5VW00 463 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 SHQ1Q6PI26 577 aaKnown RBP19.67■□□□□ 0.74
C9orf3-215ENST00000478473 SHFQ7M4L6 423 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 DPY19L4Q7Z388 723 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 PLPP7Q8NBV4 271 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 INTS14Q96SY0 518 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 ABHD6Q9BV23 337 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 METTL17Q9H7H0 456 aaPredicted RBP19.67■□□□□ 0.74
C9orf3-215ENST00000478473 MED20Q9H944 212 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 ZNF556Q9HAH1 456 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 TMEM165Q9HC07 324 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 SLC25A19Q9HC21 320 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 UBAP1Q9NZ09 502 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 MRPL15Q9P015 296 aaKnown RBP19.67■□□□□ 0.74
C9orf3-215ENST00000478473 OPN4Q9UHM6 478 aa19.67■□□□□ 0.74
C9orf3-215ENST00000478473 PRODHO43272 600 aa19.66■□□□□ 0.74
C9orf3-215ENST00000478473 GMDSO60547 372 aa19.66■□□□□ 0.74
C9orf3-215ENST00000478473 HLA-DPB1P04440 258 aa19.66■□□□□ 0.74
C9orf3-215ENST00000478473 WNT2P09544 360 aa19.66■□□□□ 0.74
C9orf3-215ENST00000478473 RBMXP38159 391 aaKnown RBP19.66■□□□□ 0.74
C9orf3-215ENST00000478473 FAHD1Q6P587 224 aa19.66■□□□□ 0.74
C9orf3-215ENST00000478473 KLBQ86Z14 1044 aa19.66■□□□□ 0.74
C9orf3-215ENST00000478473 ZNF420Q8TAQ5 688 aaPredicted RBP19.66■□□□□ 0.74
C9orf3-215ENST00000478473 SPRYD4Q8WW59 207 aaPredicted RBP19.66■□□□□ 0.74
C9orf3-215ENST00000478473 MMADHCQ9H3L0 296 aaPredicted RBP19.66■□□□□ 0.74
C9orf3-215ENST00000478473 CENPMQ9NSP4 180 aa19.66■□□□□ 0.74
C9orf3-215ENST00000478473 PCDHB10Q9UN67 800 aa19.66■□□□□ 0.74
C9orf3-215ENST00000478473 XRCC2O43543 280 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 APOC1P02654 83 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 PRKACGP22612 351 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 DDOSTP39656 456 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 OPRL1P41146 370 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 PRKXP51817 358 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 PRSS12P56730 875 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 TUSC1Q2TAM9 212 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 C1orf87Q8N0U7 546 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 PARP8Q8N3A8 854 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 OR2AE1Q8NHA4 323 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 LRCH1Q9Y2L9 728 aa19.65■□□□□ 0.74
C9orf3-215ENST00000478473 ARHGAP32A7KAX9 2087 aa19.64■□□□□ 0.74
C9orf3-215ENST00000478473 LRRC30A6NM36 301 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 CEACAM18A8MTB9 384 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 PRR23D1E9PI22 279 aaPredicted RBP19.64■□□□□ 0.73
C9orf3-215ENST00000478473 ATP5HO75947 161 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 PRR23D2P0DMB1 279 aaPredicted RBP19.64■□□□□ 0.73
C9orf3-215ENST00000478473 SLC2A5P22732 501 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 RASSF2P50749 326 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 LCN2P80188 198 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 EIF2B1Q14232 305 aaKnown RBP19.64■□□□□ 0.73
C9orf3-215ENST00000478473 TAF13Q15543 124 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 ZNF404Q494X3 552 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 SLC35D3Q5M8T2 416 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 USP43Q70EL4 1123 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 MOGAT3Q86VF5 341 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 ERI1Q8IV48 349 aaKnown RBP19.64■□□□□ 0.73
C9orf3-215ENST00000478473 ZNF454Q8N9F8 522 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 SPERTQ8NA61 448 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 DEFB108BQ8NET1 73 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 OR6N2Q8NGY6 317 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 OTOSQ8NHW6 89 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms