RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CT45A2Q5DJT8 189 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 KLF17Q5JT82 389 aaPredicted RBP3.5□□□□□ -1.85
VPS50-214ENST00000477935 KHDRBS2Q5VWX1 349 aaKnown RBP3.5□□□□□ -1.85
VPS50-214ENST00000477935 C11orf88Q6PI97 169 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 Q6ZVQ6 151 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 CARM1Q86X55 608 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 WDFY1Q8IWB7 410 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 OR8H3Q8N146 312 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 CEP112Q8N8E3 955 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 ZSCAN4Q8NAM6 433 aaPredicted RBP3.5□□□□□ -1.85
VPS50-214ENST00000477935 DEFB108BQ8NET1 73 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 WFDC9Q8NEX5 89 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 OR52E2Q8NGJ4 325 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 ST7LQ8TDW4 575 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 CKAP2Q8WWK9 683 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 APH1AQ96BI3 265 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 WDR34Q96EX3 536 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 TIMD4Q96H15 378 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 ZNF317Q96PQ6 595 aaPredicted RBP3.5□□□□□ -1.85
VPS50-214ENST00000477935 SLC38A2Q96QD8 506 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 OSBPL8Q9BZF1 889 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 C5orf66Q9H5L9 145 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 ZNF385DQ9H6B1 395 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 FNDC4Q9H6D8 234 aaPredicted RBP3.5□□□□□ -1.85
VPS50-214ENST00000477935 ZNF275Q9NSD4 429 aaPredicted RBP3.5□□□□□ -1.85
VPS50-214ENST00000477935 SEC14L4Q9UDX3 406 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 PURGQ9UJV8 347 aaKnown RBP3.5□□□□□ -1.85
VPS50-214ENST00000477935 PSME2Q9UL46 239 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 PLLPQ9Y342 182 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 ASB4Q9Y574 426 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 A0A1W2PRQ8 180 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 WASHC1A8K0Z3 465 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 M0R233 179 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 KIF2AO00139 706 aaPredicted RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 TRAF3IP2O43734 574 aaPredicted RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 SCO2O43819 266 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 MRPL33O75394 65 aaKnown RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 EEDO75530 441 aaKnown RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 IGHV2-5P01817 119 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 OPN1LWP04000 364 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 APRTP07741 180 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 CSNK2A2P19784 350 aaPredicted RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 ELK4P28324 431 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 RAP1GDS1P52306 607 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 NAAAQ02083 359 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 DMRTC1Q5HYR2 192 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 NHLRC1Q6VVB1 395 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 APTXQ7Z2E3 356 aaKnown RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 LRRC70Q7Z2Q7 622 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 CEACAM19Q7Z692 300 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 KRT77Q7Z794 578 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 TCAIMQ8N3R3 496 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 NHLRC2Q8NBF2 726 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 OR52R1Q8NGF1 315 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 ZNF75CPQ92670 426 aaPredicted RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 RAB1CQ92928 201 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 TRIM44Q96DX7 344 aaPredicted RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 SERPINB12Q96P63 405 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 TSSK2Q96PF2 358 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 CITED2Q99967 270 aaPredicted RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 TBL1XR1Q9BZK7 514 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 CHIAQ9BZP6 476 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 GRPEL1Q9HAV7 217 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 ZMAT5Q9UDW3 170 aaKnown RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 IL20RAQ9UHF4 553 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 ZNF346Q9UL40 294 aaKnown RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 NOSIPQ9Y314 301 aaKnown RBP3.49□□□□□ -1.85
VPS50-214ENST00000477935 OR10H1Q9Y4A9 318 aa3.49□□□□□ -1.85
VPS50-214ENST00000477935 KIAA1109Q2LD37 5005 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 IGHV1-18A0A0C4DH31 117 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 A4D1N5 150 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 PDLIM1O00151 329 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 RP2O75695 350 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 TTC4O95801 387 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 ANGPTL1O95841 491 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 RLN1P04808 185 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 PTMAP06454 111 aaKnown RBP3.48□□□□□ -1.85
VPS50-214ENST00000477935 MELTFP08582 738 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 IGFBP1P08833 259 aaPredicted RBP3.48□□□□□ -1.85
VPS50-214ENST00000477935 GP9P14770 177 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 CRYBB2P43320 205 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 MAGEA8P43361 318 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 HADHBP55084 474 aaKnown RBP3.48□□□□□ -1.85
VPS50-214ENST00000477935 CRADDP78560 199 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 LCN2P80188 198 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 SARNPP82979 210 aaKnown RBP3.48□□□□□ -1.85
VPS50-214ENST00000477935 MYL5Q02045 173 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 SLC3A1Q07837 685 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 BST1Q10588 318 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 STX5Q13190 355 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 EXOSC7Q15024 291 aaKnown RBP3.48□□□□□ -1.85
VPS50-214ENST00000477935 TMEM176BQ3YBM2 270 aaPredicted RBP3.48□□□□□ -1.85
VPS50-214ENST00000477935 CDKL4Q5MAI5 379 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.48□□□□□ -1.85
VPS50-214ENST00000477935 MED27Q6P2C8 311 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 PET117Q6UWS5 81 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 C4orf22Q6V702 233 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 MARCH3Q86UD3 253 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 MISPQ8IVT2 679 aa3.48□□□□□ -1.85
VPS50-214ENST00000477935 PARP8Q8N3A8 854 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms