RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 DNAJC9Q8WXX5 260 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 ERGIC1Q969X5 290 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 INTS14Q96SY0 518 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 COPS4Q9BT78 406 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 TMPRSS13Q9BYE2 586 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 SLC22A4Q9H015 551 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 MMADHCQ9H3L0 296 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-211ENST00000477612 TOR3AQ9H497 397 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 SLC25A19Q9HC21 320 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 CENPMQ9NSP4 180 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 A0A0G2JMP0 313 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 A0A0X1KG70 313 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 CD300LBA8K4G0 201 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 F5H0A9 414 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-211ENST00000477612 F5H5P2 479 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 AVPP01185 164 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 PAICSP22234 425 aaKnown RBP18.29■□□□□ 0.52
COL9A3-211ENST00000477612 POU1F1P28069 291 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 GSTT1P30711 240 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 RBMXP38159 391 aaKnown RBP18.29■□□□□ 0.52
COL9A3-211ENST00000477612 CD200P41217 278 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 SLC15A1P46059 708 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 GRB2P62993 217 aaKnown RBP18.29■□□□□ 0.52
COL9A3-211ENST00000477612 MAB21L1Q13394 359 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 ZMYND11Q15326 602 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 FAHD2BQ6P2I3 314 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-211ENST00000477612 SHFQ7M4L6 423 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 MRPL21Q7Z2W9 205 aaKnown RBP18.29■□□□□ 0.52
COL9A3-211ENST00000477612 KLHL36Q8N4N3 616 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 OR4M2Q8NGB6 313 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 ZNF420Q8TAQ5 688 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-211ENST00000477612 RNF133Q8WVZ7 376 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 SPSB4Q96A44 273 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 FAHD2AQ96GK7 314 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 ABHD6Q9BV23 337 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 OPA3Q9H6K4 179 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 UBAP1Q9NZ09 502 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 METRNQ9UJH8 293 aa18.29■□□□□ 0.52
COL9A3-211ENST00000477612 C5orf63A6NC05 138 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 PRR23D1E9PI22 279 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-211ENST00000477612 PRODHO43272 600 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 FOXH1O75593 365 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 PTBP3O95758 552 aaKnown RBP18.28■□□□□ 0.52
COL9A3-211ENST00000477612 HLA-DPB1P04440 258 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 PRR23D2P0DMB1 279 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-211ENST00000477612 MDH2P40926 338 aaKnown RBP18.28■□□□□ 0.52
COL9A3-211ENST00000477612 PRKXP51817 358 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 RAD23AP54725 363 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 PRSS12P56730 875 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 EIF2B1Q14232 305 aaKnown RBP18.28■□□□□ 0.52
COL9A3-211ENST00000477612 TAF13Q15543 124 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 KRTAP24-1Q3LI83 254 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 GLYATL3Q5SZD4 288 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 FAHD1Q6P587 224 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 MUC20Q8N307 709 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-211ENST00000477612 OR6N2Q8NGY6 317 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 Q8TCH9 128 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 TMEM165Q9HC07 324 aa18.28■□□□□ 0.52
COL9A3-211ENST00000477612 NOP16Q9Y3C1 178 aaKnown RBP18.28■□□□□ 0.52
COL9A3-211ENST00000477612 A8MXK9 166 aa18.27■□□□□ 0.52
COL9A3-211ENST00000477612 XRCC2O43543 280 aa18.27■□□□□ 0.52
COL9A3-211ENST00000477612 APOC1P02654 83 aa18.27■□□□□ 0.52
COL9A3-211ENST00000477612 PMELP40967 661 aa18.27■□□□□ 0.52
COL9A3-211ENST00000477612 PLBD1Q6P4A8 553 aa18.27■□□□□ 0.52
COL9A3-211ENST00000477612 PRSS45Q7RTY3 260 aa18.27■□□□□ 0.52
COL9A3-211ENST00000477612 ERI1Q8IV48 349 aaKnown RBP18.27■□□□□ 0.52
COL9A3-211ENST00000477612 PARP8Q8N3A8 854 aa18.27■□□□□ 0.52
COL9A3-211ENST00000477612 OR2AE1Q8NHA4 323 aa18.27■□□□□ 0.52
COL9A3-211ENST00000477612 SPRYD4Q8WW59 207 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-211ENST00000477612 DUS3LQ96G46 650 aaKnown RBP18.27■□□□□ 0.52
COL9A3-211ENST00000477612 OR51V1Q9H2C8 321 aa18.27■□□□□ 0.52
COL9A3-211ENST00000477612 MRPL15Q9P015 296 aaKnown RBP18.27■□□□□ 0.52
COL9A3-211ENST00000477612 PCDHB10Q9UN67 800 aa18.27■□□□□ 0.52
COL9A3-211ENST00000477612 GMDSO60547 372 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 TIPRLO75663 272 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 SLC2A5P22732 501 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 ZFP36P26651 326 aaKnown RBP18.26■□□□□ 0.51
COL9A3-211ENST00000477612 SLC35D3Q5M8T2 416 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 DCAF12L2Q5VW00 463 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 LIPNQ5VXI9 398 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 MOGAT3Q86VF5 341 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 CPOQ8IVL8 374 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 C1orf87Q8N0U7 546 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 PLPP7Q8NBV4 271 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 OR5K1Q8NHB7 308 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 OTOSQ8NHW6 89 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 OTULINQ96BN8 352 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 METTL17Q9H7H0 456 aaPredicted RBP18.26■□□□□ 0.51
COL9A3-211ENST00000477612 SP140LQ9H930 580 aa18.26■□□□□ 0.51
COL9A3-211ENST00000477612 TCF21O43680 179 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 CYB5R3P00387 301 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-211ENST00000477612 WNT2P09544 360 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 SLC2A1P11166 492 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 DDOSTP39656 456 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 OPRL1P41146 370 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 CX3CR1P49238 355 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 DAPP51397 102 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 CRISP1P54107 249 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 LCN2P80188 198 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 SCGB2A2Q13296 93 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms