RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 OR4C16Q8NGL9 310 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 CPT1CQ8TCG5 803 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 SFXN5Q8TD22 340 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 GHSRQ92847 366 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 RAB11FIP5Q9BXF6 653 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 ARV1Q9H2C2 271 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 MYNNQ9NPC7 610 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 DMRT3Q9NQL9 472 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 XIRP2A4UGR9 3374 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 CCDC88CQ9P219 2028 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 SZT2Q5T011 3432 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 TRBC2A0A5B9 178 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 FAM227AF5H4B4 570 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 CYB5BO43169 146 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 CPSF4O95639 269 aaKnown RBP11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 CEACAM5P06731 702 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 PGA3P0DJD8 388 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 COL9A1P20849 921 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 CHATP28329 748 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 CD34P28906 385 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 TIA1P31483 386 aaKnown RBP eCLIP11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 GABRA4P48169 554 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 BTG2P78543 158 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 RPS26P11Q5JNZ5 115 aaPredicted RBP11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 TMEM69Q5SWH9 247 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 PRAMEF20Q5VT98 475 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 DPY19L2P2Q6ZN68 376 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 SLC25A26Q70HW3 274 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 GKN2Q86XP6 184 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 CXorf40BQ96DE9 158 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 PGAM5Q96HS1 289 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 IL17FQ96PD4 163 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 AIF1LQ9BQI0 150 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 SLC25A21Q9BQT8 299 aaPredicted RBP11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 NUDT16L1Q9BRJ7 211 aaKnown RBP11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 ORAI3Q9BRQ5 295 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 PELI2Q9HAT8 420 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 B3GAT1Q9P2W7 334 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 HSPB7Q9UBY9 170 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 PLAGL1Q9UM63 463 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 DOCK9Q9BZ29 2069 aa11.36□□□□□ -0.59
RTFDC1-207ENST00000477573 A0A0B4J2A0 478 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 FFAR1O14842 300 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 SLC31A1O15431 190 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 SCGNO76038 276 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 MBPP02686 304 aaPredicted RBP11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 H1F0P07305 194 aaKnown RBP11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 AKAIN1P0CW23 69 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 FHITP49789 147 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 POLR2HP52434 150 aaKnown RBP11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 TAF9Q16594 264 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 LRRC37A5PQ49AS3 106 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 CPTPQ5TA50 214 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 OR1P1Q8NH06 330 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 C1orf216Q8TAB5 229 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 STT3BQ8TCJ2 826 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 OR1E3Q8WZA6 343 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 SCRT1Q9BWW7 348 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 ANGPTL4Q9BY76 406 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 TBL1XR1Q9BZK7 514 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 SLC2A9Q9NRM0 540 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 AHSPQ9NZD4 102 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 MTFP1Q9UDX5 166 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 SHPKQ9UHJ6 478 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 HS3ST3B1Q9Y662 390 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 C2CD4DB7Z1M9 353 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 H7BY64 318 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 AGPAT2O15120 278 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 SRPX2O60687 465 aaPredicted RBP11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 ETHE1O95571 254 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 HPRT1P00492 218 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 LCATP04180 440 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 FGF5P12034 268 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 SERPINA2P20848 420 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 IGFBP4P22692 258 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 S100A7P31151 101 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 ZNF763Q0D2J5 394 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 ENTPD8Q5MY95 495 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 OR5AK2Q8NH90 309 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 CD300LFQ8TDQ1 290 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 TMEM18Q96B42 140 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 OR8B4Q96RC9 309 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 TCEAL2Q9H3H9 227 aaPredicted RBP11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 POFUT1Q9H488 388 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 PDE7BQ9NP56 450 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 RHCGQ9UBD6 479 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 TAC3Q9UHF0 121 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 SH2B3Q9UQQ2 575 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 HEBP2Q9Y5Z4 205 aa11.35□□□□□ -0.59
RTFDC1-207ENST00000477573 A0A1B0GW64 132 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 PRAMEF26H0Y7S4 382 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 J3QRE1 110 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 TAAR5O14804 337 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 DOK2O60496 412 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 VAMP5O95183 116 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 TSPAN15O95858 294 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 DCNP07585 359 aaKnown RBP11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 HTR1FP30939 366 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 OR10J1P30954 320 aa11.34□□□□□ -0.59
RTFDC1-207ENST00000477573 ARR3P36575 388 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms