RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TMPRSS11AQ6ZMR5 421 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 PRSS45Q7RTY3 260 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 OR5L1Q8NGL2 311 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 DHRS9Q9BPW9 319 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 OR2J1Q9GZK6 312 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 CCDC90BQ9GZT6 254 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 SP140LQ9H930 580 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 CLEC2DQ9UHP7 191 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 FZR1Q9UM11 496 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 STARD10Q9Y365 291 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 CAB39Q9Y376 341 aaPredicted RBP13.17□□□□□ -0.3
SEC13-215ENST00000477547 CMAHPQ9Y471 501 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 C5orf63A6NC05 138 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 H3BSA7 217 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 XRCC2O43543 280 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 SRSF10O75494 262 aaKnown RBP13.16□□□□□ -0.3
SEC13-215ENST00000477547 PNPP00491 289 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 MT-ND2P03891 347 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 MT-ND5P03915 603 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 FABP6P51161 128 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 MMP16P51512 607 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 ADIPOQQ15848 244 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 TIGD6Q17RP2 521 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 MSMPQ1L6U9 139 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 GLYATL3Q5SZD4 288 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 MRPL21Q7Z2W9 205 aaKnown RBP13.16□□□□□ -0.3
SEC13-215ENST00000477547 KCTD20Q7Z5Y7 419 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 C1orf174Q8IYL3 243 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 OR8B12Q8NGG6 310 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 OR52H1Q8NGJ2 320 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 OR52N1Q8NH53 320 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 OR2AE1Q8NHA4 323 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 SPRYD4Q8WW59 207 aaPredicted RBP13.16□□□□□ -0.3
SEC13-215ENST00000477547 RORBQ92753 470 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 MRPL24Q96A35 216 aaKnown RBP13.16□□□□□ -0.3
SEC13-215ENST00000477547 PELI1Q96FA3 418 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 SIGLEC11Q96RL6 698 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 SYT3Q9BQG1 590 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 OR10A2Q9H208 303 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 ISG20L2Q9H9L3 353 aaKnown RBP13.16□□□□□ -0.3
SEC13-215ENST00000477547 FAIMQ9NVQ4 179 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 NUFIP1Q9UHK0 495 aaKnown RBP13.16□□□□□ -0.3
SEC13-215ENST00000477547 SPG11Q96JI7 2443 aa13.16□□□□□ -0.3
SEC13-215ENST00000477547 TMEM129A0AVI4 362 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 ATE1O95260 518 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 HTR1AP08908 422 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 OR4A8P0C604 315 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 GCH1P30793 250 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 MPV17P39210 176 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 KLF3P57682 345 aaPredicted RBP13.15□□□□□ -0.3
SEC13-215ENST00000477547 ZNF718Q3SXZ3 478 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 KCTD21Q4G0X4 260 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 C20orf204Q6ZNR8 217 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 PRSS48Q7RTY5 328 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 COMMD2Q86X83 199 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 FBXL14Q8N1E6 418 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 ZNF611Q8N823 705 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 MARS2Q96GW9 593 aaKnown RBP13.15□□□□□ -0.3
SEC13-215ENST00000477547 MND1Q9BWT6 205 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 CDCA4Q9BXL8 241 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 YTHDF1Q9BYJ9 559 aaKnown RBP13.15□□□□□ -0.3
SEC13-215ENST00000477547 MRPL37Q9BZE1 423 aaKnown RBP13.15□□□□□ -0.3
SEC13-215ENST00000477547 PBOV1Q9GZY1 135 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 PLEKHF2Q9H8W4 249 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 OR52A1Q9UKL2 312 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 ERGIC3Q9Y282 383 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 SNX5Q9Y5X3 404 aa13.15□□□□□ -0.3
SEC13-215ENST00000477547 CHD3Q12873 2000 aaKnown RBP13.15□□□□□ -0.3
SEC13-215ENST00000477547 A0A1W2PPW3 197 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 ACOD1A6NK06 481 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 VSTM5A8MXK1 200 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 TUBG1P23258 451 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 APOBEC3AP31941 199 aaPredicted RBP13.14□□□□□ -0.31
SEC13-215ENST00000477547 TTKP33981 857 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 CHN2P52757 468 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 GBX2P52951 348 aaPredicted RBP13.14□□□□□ -0.31
SEC13-215ENST00000477547 WNT4P56705 351 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 PRSS12P56730 875 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 MRPL28Q13084 256 aaKnown RBP13.14□□□□□ -0.31
SEC13-215ENST00000477547 HLXQ14774 488 aaPredicted RBP13.14□□□□□ -0.31
SEC13-215ENST00000477547 WDR38Q5JTN6 314 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 MBNL2Q5VZF2 373 aaKnown RBP13.14□□□□□ -0.31
SEC13-215ENST00000477547 FBXW12Q6X9E4 464 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 CATSPERDQ86XM0 798 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 KLBQ86Z14 1044 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 MUC15Q8N387 334 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 SYNPRQ8TBG9 265 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 KLF14Q8TD94 323 aaPredicted RBP13.14□□□□□ -0.31
SEC13-215ENST00000477547 HAVCR2Q8TDQ0 301 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 REEP6Q96HR9 211 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 PLK3Q9H4B4 646 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 OPA3Q9H6K4 179 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 TRIM36Q9NQ86 728 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 G6PC2Q9NQR9 355 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 TUBG2Q9NRH3 451 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 ZNF319Q9P2F9 582 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 DUSP13Q9UII6 198 aa13.14□□□□□ -0.31
SEC13-215ENST00000477547 TNFAIP8O95379 198 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 CLPTM1O96005 669 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 TTRP02766 147 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms