RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 HIST1H2BHQ93079 126 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 UBE2E3Q969T4 207 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 TMEM106AQ96A25 262 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 SLC25A28Q96A46 364 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 PTX4Q96A99 478 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 ESAMQ96AP7 390 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 TMEM159Q96B96 161 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 MS4A6EQ96DS6 147 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 DTD2Q96FN9 168 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 PGLYRP3Q96LB9 341 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 HIST1H2BNQ99877 126 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 HIST1H2BMQ99879 126 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 HIST1H2BLQ99880 126 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 SEMA3CQ99985 751 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 C20orf144Q9BQM9 153 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 MED10Q9BTT4 135 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 SLC25A31Q9H0C2 315 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 ZBP1Q9H171 429 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 TAF9BQ9HBM6 251 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 CYTL1Q9NRR1 136 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 KLHL28Q9NXS3 571 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 AHSPQ9NZD4 102 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 P2RX2Q9UBL9 471 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 CACNG4Q9UBN1 327 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 Q9UFV3 132 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 SLC13A4Q9UKG4 626 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 IKZF2Q9UKS7 526 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 SRPK3Q9UPE1 567 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 OSGIN2Q9Y236 505 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 ASF1AQ9Y294 204 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 AMDHD2Q9Y303 409 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 ARL5AQ9Y689 179 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 MTCL1Q9Y4B5 1905 aaKnown RBP4.21□□□□□ -1.74
PTCD3-212ENST00000477520 PLXNA4Q9HCM2 1894 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 TMEM272A0A1B0GTI8 110 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 CPED1A4D0V7 1026 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 TLCD2A6NGC4 264 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 NKX6-3A6NJ46 265 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 FAM183AA6NL82 134 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 B4E171 279 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 CLDN34H7C241 214 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 K7EPK0 472 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 GRM6O15303 877 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 PRAMEF11O60813 436 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 MMP23AO75900 390 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 LRATO95237 230 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 SYNGR4O95473 234 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 AGR2O95994 175 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 IFNA21P01568 189 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 CSTBP04080 98 aaKnown RBP4.2□□□□□ -1.74
PTCD3-212ENST00000477520 SFTPBP07988 381 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 TACSTD2P09758 323 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 THEGLP0DJG4 465 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 CT45A8P0DMV1 189 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 CT45A9P0DMV2 189 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 NR2F1P10589 423 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 FABP4P15090 132 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 PGAM2P15259 253 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 MSR1P21757 451 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 ZBTB25P24278 435 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 CDK2P24941 298 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 LMO2P25791 158 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 AOAHP28039 575 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 GDI1P31150 447 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 DCTDP32321 178 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 WNT5AP41221 380 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 GLIPR1P48060 266 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 GABRA4P48169 554 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 ARRB1P49407 418 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-212ENST00000477520 RPS23P62266 143 aaKnown RBP4.2□□□□□ -1.74
PTCD3-212ENST00000477520 HIST1H3AP68431 136 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 HBA1P69905 142 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 SIRPAP78324 504 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 PITX1P78337 314 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-212ENST00000477520 SIM1P81133 766 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-212ENST00000477520 PSG6Q00889 435 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 IRF8Q02556 426 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 SIGLEC14Q08ET2 396 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 DHRS2Q13268 280 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 MELKQ14680 651 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 TAF9Q16594 264 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 ACOT6Q3I5F7 207 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-212ENST00000477520 FNDC3BQ53EP0 1204 aaKnown RBP4.2□□□□□ -1.74
PTCD3-212ENST00000477520 HIKESHIQ53FT3 197 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 CT45A2Q5DJT8 189 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 PLEKHS1Q5SXH7 462 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 PLPP4Q5VZY2 271 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 OR8G2PQ6IF36 304 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 FAM71E1Q6IPT2 247 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 SLC8B1Q6J4K2 584 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 CLEC2AQ6UVW9 174 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 C16orf54Q6UWD8 224 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 UNQ6126/PRO20091Q6UXV3 157 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 FCRLAQ7L513 359 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 NUFIP2Q7Z417 695 aaKnown RBP4.2□□□□□ -1.74
PTCD3-212ENST00000477520 MYPOPQ86VE0 399 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-212ENST00000477520 COMMD2Q86X83 199 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 SCN4BQ8IWT1 228 aa4.2□□□□□ -1.74
PTCD3-212ENST00000477520 DND1Q8IYX4 353 aaKnown RBP4.2□□□□□ -1.74
PTCD3-212ENST00000477520 FAM185AQ8N0U4 392 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms