RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 NOX4Q9NPH5 578 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 SLC45A2Q9UMX9 530 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 AURKCQ9UQB9 309 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 TEX13CA0A0J9YWL9 993 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 TMEM178BH3BS89 294 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 TIMM23O14925 209 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 SLC22A2O15244 555 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 EDF1O60869 148 aaKnown RBP6.09□□□□□ -1.43
BRCA1-214ENST00000477152 NDUFB2O95178 105 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 NGFP01138 241 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 GZMMP51124 257 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 RAP2BP61225 183 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 RPL15P61313 204 aaKnown RBP6.09□□□□□ -1.43
BRCA1-214ENST00000477152 PAX8Q06710 450 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 ECH1Q13011 328 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 ENDOGQ14249 297 aaKnown RBP6.09□□□□□ -1.43
BRCA1-214ENST00000477152 KRT72Q14CN4 511 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 IFI44LQ53G44 452 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 GPR157Q5UAW9 335 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 C16orf87Q6PH81 154 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 MBOAT2Q6ZWT7 520 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 FAM90A1Q86YD7 464 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 NRMQ8IXM6 262 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 PARP8Q8N3A8 854 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 POU5F2Q8N7G0 328 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 OR8G5Q8NG78 346 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 OR1F12Q8NHA8 337 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 RAB40AQ8WXH6 277 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 C22orf15Q8WYQ4 148 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 GTF3AQ92664 365 aaKnown RBP6.09□□□□□ -1.43
BRCA1-214ENST00000477152 FAM71F1Q96KD3 344 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-214ENST00000477152 HDHD2Q9H0R4 259 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 C11orf54Q9H0W9 315 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-214ENST00000477152 TMEM100Q9NV29 134 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 CLN8Q9UBY8 286 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 ZNF69Q9UC07 566 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 RPS6KA6Q9UK32 745 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 CUBNO60494 3623 aa6.09□□□□□ -1.43
BRCA1-214ENST00000477152 IGHV2-70DA0A0C4DH43 119 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 PRSS37A4D1T9 235 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 CEACAM18A8MTB9 384 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 F5H0A9 414 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-214ENST00000477152 NDUFA2O43678 99 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 ENSAO43768 121 aaKnown RBP6.08□□□□□ -1.44
BRCA1-214ENST00000477152 RENP00797 406 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 WNT2P09544 360 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 ZFP36P26651 326 aaKnown RBP6.08□□□□□ -1.44
BRCA1-214ENST00000477152 CENPAP49450 140 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 SMIM11AP58511 58 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 RABL3Q5HYI8 236 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 C1orf94Q6P1W5 598 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 ZNF529Q6P280 563 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 FBXW12Q6X9E4 464 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 TMPRSS11FQ6ZWK6 438 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 KLBQ86Z14 1044 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 OR2AJ1Q8NGZ0 328 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 UPRTQ96BW1 309 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 COQ7Q99807 217 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 HOPXQ9BPY8 73 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-214ENST00000477152 RERGLQ9H628 205 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 VIPAS39Q9H9C1 493 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 NMNAT1Q9HAN9 279 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-214ENST00000477152 ESM1Q9NQ30 184 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 ERVK-18Q9QC07 812 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 OAZ3Q9UMX2 235 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 A4GNTQ9UNA3 340 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 MMP24Q9Y5R2 645 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 DOCK11Q5JSL3 2073 aa6.08□□□□□ -1.44
BRCA1-214ENST00000477152 TRAV27A0A087WT01 109 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 M0QZ24 198 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 P2RY10O00398 339 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 PHYHO14832 338 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 HOXA3O43365 443 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-214ENST00000477152 SLC16A7O60669 478 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 SHOX2O60902 331 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-214ENST00000477152 ZNF682O95780 498 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 IFNGR2P38484 337 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 PITPNBP48739 271 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 KRR1Q13601 381 aaKnown RBP6.07□□□□□ -1.44
BRCA1-214ENST00000477152 ZMYND11Q15326 602 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 LEG1Q6P5S2 330 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 DCDC5Q6ZRR9 648 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 IGFN1Q86VF2 1251 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 TMEM86BQ8N661 226 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 PNLDC1Q8NA58 520 aaKnown RBP6.07□□□□□ -1.44
BRCA1-214ENST00000477152 SPERTQ8NA61 448 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 LRRC75AQ8NAA5 344 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 TBC1D15Q8TC07 691 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 NUDT16L1Q9BRJ7 211 aaKnown RBP6.07□□□□□ -1.44
BRCA1-214ENST00000477152 TMEM120AQ9BXJ8 343 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 MMP26Q9NRE1 261 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 PTTG3PQ9NZH4 202 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 STARD10Q9Y365 291 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 CAB39Q9Y376 341 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-214ENST00000477152 SNX13Q9Y5W8 968 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 CAPN7Q9Y6W3 813 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 IGKV1D-43A0A0B4J1Z2 117 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 KIR2DS1A0A191URI9 304 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 IQCF6A8MYZ5 107 aa6.07□□□□□ -1.44
BRCA1-214ENST00000477152 TRAPPC2LH3BP13 241 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms