RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 A0A1B0GVI7 797 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 AIPO00170 330 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 PDCD5O14737 125 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 TBX1O43435 398 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 RAD51DO75771 328 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 CNOT4O95628 575 aaKnown RBP12.56□□□□□ -0.4
COL4A6-206ENST00000477085 TMIGD3P0DMS9 266 aaPredicted RBP12.56□□□□□ -0.4
COL4A6-206ENST00000477085 CD37P11049 281 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 ELK1P19419 428 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 FSTP19883 344 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 COX5AP20674 150 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 CEACAM8P31997 349 aaPredicted RBP12.56□□□□□ -0.4
COL4A6-206ENST00000477085 PER3P56645 1201 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 CLDN12P56749 244 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 SF3B4Q15427 424 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL4A6-206ENST00000477085 ZNF529Q6P280 563 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 GFRALQ6UXV0 394 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 Q6ZSR3 168 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 LYPD6Q86Y78 171 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 ACOT12Q8WYK0 555 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 KCTD12Q96CX2 325 aaKnown RBP12.56□□□□□ -0.4
COL4A6-206ENST00000477085 SOSTQ9BQB4 213 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 A0A1B0GVG6 124 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 A0A1W2PR80 420 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 APOC1P02654 83 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 CD2P06729 351 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 PPP5CP53041 499 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 PRSS12P56730 875 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 ZNF45Q02386 682 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 TNK1Q13470 666 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 MADCAM1Q13477 382 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 ZNF79Q15937 498 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 RNF144BQ7Z419 303 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 MDP1Q86V88 176 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 KDF1Q8NAX2 398 aaPredicted RBP12.56□□□□□ -0.4
COL4A6-206ENST00000477085 OR2AE1Q8NHA4 323 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 TRMT10AQ8TBZ6 339 aaKnown RBP12.56□□□□□ -0.4
COL4A6-206ENST00000477085 THRSPQ92748 146 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 MS4A3Q96HJ5 214 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 POM121L2Q96KW2 1035 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 SLITRK2Q9H156 845 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 TINAGQ9UJW2 476 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 RHBDD3Q9Y3P4 386 aa12.56□□□□□ -0.4
COL4A6-206ENST00000477085 SLC19A2O60779 497 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 LCATP04180 440 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 EIF4EP06730 217 aaKnown RBP12.55□□□□□ -0.4
COL4A6-206ENST00000477085 EDN3P14138 238 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 STOMP27105 288 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 ARR3P36575 388 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 DDOSTP39656 456 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 EVX1P49640 407 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 PPP3R1P63098 170 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 SPOCK1Q08629 439 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 GLYATL3Q5SZD4 288 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 MZT2AQ6P582 158 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 COLCA1Q6ZS62 124 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 NCCRP1Q6ZVX7 275 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-206ENST00000477085 DOK3Q7L591 496 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 MYPOPQ86VE0 399 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-206ENST00000477085 COMMD2Q86X83 199 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 SERPINA12Q8IW75 414 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 PAQR4Q8N4S7 273 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-206ENST00000477085 OR52H1Q8NGJ2 320 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 CEP19Q96LK0 163 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 C1QTNF5Q9BXJ0 243 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 PROCRQ9UNN8 238 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 V9GYS6 101 aa12.55□□□□□ -0.4
COL4A6-206ENST00000477085 C5orf49A4QMS7 147 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 UBL3O95164 117 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 IL2RAP01589 272 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 CRHP06850 196 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 COX5BP10606 129 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 PLA2G7Q13093 441 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 GSG1Q2KHT4 349 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 SPANXN2Q5MJ10 180 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 FAM166AQ6J272 317 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 CNIH2Q6PI25 160 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 ZNF474Q6S9Z5 364 aaPredicted RBP12.54□□□□□ -0.4
COL4A6-206ENST00000477085 CXorf67Q86X51 503 aaPredicted RBP12.54□□□□□ -0.4
COL4A6-206ENST00000477085 SAMD12Q8N8I0 201 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 DTX3Q8N9I9 347 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 WDR31Q8NA23 367 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 DIRAS2Q96HU8 199 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 BOD1Q96IK1 185 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 OR10A2Q9H208 303 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 LIN7BQ9HAP6 207 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 ABRACLQ9P1F3 81 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 ATPIF1Q9UII2 106 aa12.54□□□□□ -0.4
COL4A6-206ENST00000477085 ANXA2P2A6NMY6 339 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 TTLL8A6PVC2 850 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 PRRG2O14669 202 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 CELA3BP08861 270 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 HOXD4P09016 255 aaPredicted RBP12.53□□□□□ -0.4
COL4A6-206ENST00000477085 ACKR3P25106 362 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 CFPP27918 469 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 CD40LGP29965 261 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 ZNF92Q03936 586 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 PMPCAQ10713 525 aa12.53□□□□□ -0.4
COL4A6-206ENST00000477085 KLRB1Q12918 225 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms