RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 PXT1Q8NFP0 134 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 OR1J4Q8NGS1 313 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 OR6S1Q8NH40 331 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 NANPQ8TBE9 248 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 S100PBPQ96BU1 408 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 C14orf79Q96F83 325 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 PHB2Q99623 299 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 HINT2Q9BX68 163 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 MFRPQ9BY79 579 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 SLC5A7Q9GZV3 580 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 OPA3Q9H6K4 179 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 DUSP22Q9NRW4 184 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ADAM29Q9UKF5 820 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 PCDHB10Q9UN67 800 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ENTPD2Q9Y5L3 495 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 FREM1Q5H8C1 2179 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ABCA12Q86UK0 2595 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 DSPPQ9NZW4 1301 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 TGFBR3LH3BV60 316 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 HLA-DQB1P01920 261 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ARG1P05089 322 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 CD38P28907 300 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 TSFMP43897 325 aaKnown RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 NOVA1P51513 510 aaKnown RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 DHRS2Q13268 280 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 TSC22D1Q15714 1073 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 IAH1Q2TAA2 248 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 SPATA46Q5T0L3 261 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 RPL13AP3Q6NVV1 102 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 TCTE3Q8IZS6 198 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 NPEPL1Q8NDH3 523 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 DEFB124Q8NES8 71 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 BPIFCQ8NFQ6 507 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 TOR1AIP2Q8NFQ8 470 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 OR51F2Q8NH61 342 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 ANKRD9Q96BM1 317 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 SLC25A38Q96DW6 304 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 SCARF2Q96GP6 870 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 COX14Q96I36 57 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 SHDQ96IW2 340 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 PGLYRP3Q96LB9 341 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 MMP25Q9NPA2 562 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 DKKL1Q9UK85 242 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 CES1P1Q9UKY3 287 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 POMT2Q9UKY4 750 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 C14orf166Q9Y224 244 aaKnown RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 TRAPPC4Q9Y296 219 aa4.47□□□□□ -1.69
CCDC39-204ENST00000476379 UTP20O75691 2785 aaKnown RBP4.47□□□□□ -1.69
CCDC39-204ENST00000476379 TMEM272A0A1B0GTI8 110 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 MPTX1A8MV57 137 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 PLPP2O43688 288 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 TPOP07202 933 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 SNRPCP09234 159 aaKnown RBP4.46□□□□□ -1.69
CCDC39-204ENST00000476379 LAP3P28838 519 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 BDKRB2P30411 391 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 CD96P40200 585 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 OR3A4PP47883 348 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 ACTBP60709 375 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 RAP2BP61225 183 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 ACTG1P63261 375 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 FOXF1Q12946 379 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 RSU1Q15404 277 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 GUCA2BQ16661 112 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 HAGHQ16775 308 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 HLA-BQ31612 363 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 DPY19L2P2Q6ZN68 376 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 C6orf201Q7Z4U5 140 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.46□□□□□ -1.69
CCDC39-204ENST00000476379 TPRA1Q86W33 373 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 UEVLDQ8IX04 471 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 KCNRGQ8N5I3 272 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 ARIH2OSQ8N7S6 290 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 OR51H1Q8NH63 302 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 FAM213BQ8TBF2 198 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 RAB3CQ96E17 227 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 LCORQ96JN0 433 aaPredicted RBP4.46□□□□□ -1.69
CCDC39-204ENST00000476379 TMEM59Q9BXS4 323 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 NXF2Q9GZY0 626 aaKnown RBP4.46□□□□□ -1.69
CCDC39-204ENST00000476379 C8orf33Q9H7E9 229 aaPredicted RBP4.46□□□□□ -1.69
CCDC39-204ENST00000476379 EVA1AQ9H8M9 152 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 B3GNT2Q9NY97 397 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 GPN3Q9UHW5 284 aaPredicted RBP4.46□□□□□ -1.69
CCDC39-204ENST00000476379 SLC17A4Q9Y2C5 497 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 MRPS28Q9Y2Q9 187 aaKnown RBP4.46□□□□□ -1.69
CCDC39-204ENST00000476379 AMDHD2Q9Y303 409 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 PTRH2Q9Y3E5 179 aaKnown RBP4.46□□□□□ -1.69
CCDC39-204ENST00000476379 MMP24Q9Y5R2 645 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 TMEM14AQ9Y6G1 99 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 CRYBG3Q68DQ2 2970 aa4.46□□□□□ -1.69
CCDC39-204ENST00000476379 TRBV23-1A0A0A0MS06 115 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 RPS10-NUDT3A0A1W2PQS6 291 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 SOCS1O15524 211 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 SRPX2O60687 465 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CTAG2O75638 210 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CT45A8P0DMV1 189 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CT45A9P0DMV2 189 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CD79AP11912 226 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 RAB3AP20336 220 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 HNF1AP20823 631 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CPT2P23786 658 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms