RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 PITX2Q99697 317 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 CITED1Q99966 193 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 CHIAQ9BZP6 476 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 SIRPDQ9H106 197 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 MYLK2Q9H1R3 596 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 GORASP2Q9H8Y8 452 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 MARCH7Q9H992 704 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 KRCC1Q9NPI7 259 aaPredicted RBP10.87□□□□□ -0.67
MRPL55-228ENST00000476267 UFSP2Q9NUQ7 469 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 FAM32AQ9Y421 112 aaKnown RBP10.87□□□□□ -0.67
MRPL55-228ENST00000476267 DOCK11Q5JSL3 2073 aa10.87□□□□□ -0.67
MRPL55-228ENST00000476267 CENPVL3A0A0U1RRI6 287 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 CD300LBA8K4G0 201 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 M0R135 149 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 LGALS8O00214 317 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 P2RY10O00398 339 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 GMDSO60547 372 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 CCDC22O60826 627 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 RENP00797 406 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 LCATP04180 440 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 IRF2P14316 349 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 CA6P23280 308 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 RAG2P55895 527 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 KRTAP10-3P60369 221 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 ZNF92Q03936 586 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 SLC36A3Q495N2 470 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 FIP1L1Q6UN15 594 aaKnown RBP10.86□□□□□ -0.67
MRPL55-228ENST00000476267 ZNF620Q6ZNG0 422 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 RHOUQ7L0Q8 258 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 KIR3DL3Q8N743 410 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 OR11L1Q8NGX0 322 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 ZNF799Q96GE5 643 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 ADAT1Q9BUB4 502 aaKnown RBP10.86□□□□□ -0.67
MRPL55-228ENST00000476267 SLC22A4Q9H015 551 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 SPAG4Q9NPE6 437 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 ZNF446Q9NWS9 450 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 RNF7Q9UBF6 113 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 KCNG2Q9UJ96 466 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 POMT1Q9Y6A1 747 aa10.86□□□□□ -0.67
MRPL55-228ENST00000476267 IDH3BO43837 385 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 GADD45GO95257 159 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 KNG1P01042 644 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 LHBP01229 141 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 LIPFP07098 398 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 RPS27P42677 84 aaKnown RBP10.85□□□□□ -0.67
MRPL55-228ENST00000476267 TPTEP56180 551 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 RPL15P61313 204 aaKnown RBP10.85□□□□□ -0.67
MRPL55-228ENST00000476267 MALLQ13021 153 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 OR8G1Q15617 311 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 GLYATL3Q5SZD4 288 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 CD276Q5ZPR3 534 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 OLFML2AQ68BL7 652 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 SFRP4Q6FHJ7 346 aaPredicted RBP10.85□□□□□ -0.67
MRPL55-228ENST00000476267 MRPL21Q7Z2W9 205 aaKnown RBP10.85□□□□□ -0.67
MRPL55-228ENST00000476267 GCSAMQ8N6F7 178 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 OR2AJ1Q8NGZ0 328 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 OR4F5Q8NH21 305 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 OR2AE1Q8NHA4 323 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 SPRYD4Q8WW59 207 aaPredicted RBP10.85□□□□□ -0.67
MRPL55-228ENST00000476267 FAM71F1Q96KD3 344 aaPredicted RBP10.85□□□□□ -0.67
MRPL55-228ENST00000476267 WDFY2Q96P53 400 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 TECTBQ96PL2 329 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 PCGF1Q9BSM1 259 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 IFT27Q9BW83 186 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 FN3KRPQ9HA64 309 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 BEX1Q9HBH7 125 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 MRPL15Q9P015 296 aaKnown RBP10.85□□□□□ -0.67
MRPL55-228ENST00000476267 TGP01266 2768 aa10.85□□□□□ -0.67
MRPL55-228ENST00000476267 CLPSL1A2RUU4 121 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 OOEPA6NGQ2 149 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 C3orf80F5H4A9 247 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 BHLHE40O14503 412 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 TOX4O94842 621 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 SPIBQ01892 262 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.84□□□□□ -0.67
MRPL55-228ENST00000476267 TSPAN31Q12999 210 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 KRT72Q14CN4 511 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 KCNJ8Q15842 424 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 PCK2Q16822 640 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 TEX36Q5VZQ5 186 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 PGBD2Q6P3X8 592 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 LYPD4Q6UWN0 246 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 DRAM2Q6UX65 266 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 LDLRAD3Q86YD5 345 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 FAM90A1Q86YD7 464 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 RNF148Q8N7C7 305 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 ZDHHC16Q969W1 377 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 SPSB4Q96A44 273 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 PYURFQ96I23 114 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 MMADHCQ9H3L0 296 aaPredicted RBP10.84□□□□□ -0.67
MRPL55-228ENST00000476267 EGLN3Q9H6Z9 239 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 ERVK-18Q9QC07 812 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 KAAG1Q9UBP8 84 aa10.84□□□□□ -0.67
MRPL55-228ENST00000476267 NOP16Q9Y3C1 178 aaKnown RBP10.84□□□□□ -0.67
MRPL55-228ENST00000476267 IGHV1-69DA0A0B4J2H0 117 aa10.83□□□□□ -0.68
MRPL55-228ENST00000476267 ADAM20O43506 726 aa10.83□□□□□ -0.68
MRPL55-228ENST00000476267 NDUFA2O43678 99 aa10.83□□□□□ -0.68
MRPL55-228ENST00000476267 OR10H3O60404 316 aa10.83□□□□□ -0.68
MRPL55-228ENST00000476267 IGHV1-69P01742 117 aa10.83□□□□□ -0.68
MRPL55-228ENST00000476267 HLA-DQA2P01906 255 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms