RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 KIF17Q9P2E2 1029 aa17.84■□□□□ 0.45
LIME1-204ENST00000476183 PLPP2O43688 288 aa17.83■□□□□ 0.44
LIME1-204ENST00000476183 CRISP1P54107 249 aa17.83■□□□□ 0.44
LIME1-204ENST00000476183 KLHL12Q53G59 568 aa17.83■□□□□ 0.44
LIME1-204ENST00000476183 MRPL21Q7Z2W9 205 aaKnown RBP17.83■□□□□ 0.44
LIME1-204ENST00000476183 PEG10Q86TG7 708 aaKnown RBP17.83■□□□□ 0.44
LIME1-204ENST00000476183 PARP8Q8N3A8 854 aa17.83■□□□□ 0.44
LIME1-204ENST00000476183 ZNF420Q8TAQ5 688 aaPredicted RBP17.83■□□□□ 0.44
LIME1-204ENST00000476183 RNF133Q8WVZ7 376 aa17.83■□□□□ 0.44
LIME1-204ENST00000476183 DNAJC9Q8WXX5 260 aa17.83■□□□□ 0.44
LIME1-204ENST00000476183 DUS3LQ96G46 650 aaKnown RBP17.83■□□□□ 0.44
LIME1-204ENST00000476183 REPIN1Q9BWE0 567 aaKnown RBP17.83■□□□□ 0.44
LIME1-204ENST00000476183 UBAP1Q9NZ09 502 aa17.83■□□□□ 0.44
LIME1-204ENST00000476183 AP4S1Q9Y587 144 aa17.83■□□□□ 0.44
LIME1-204ENST00000476183 N6AMT1Q9Y5N5 214 aa17.83■□□□□ 0.44
LIME1-204ENST00000476183 CD300LBA8K4G0 201 aa17.82■□□□□ 0.44
LIME1-204ENST00000476183 TMEM178BH3BS89 294 aa17.82■□□□□ 0.44
LIME1-204ENST00000476183 SELENOFO60613 162 aa17.82■□□□□ 0.44
LIME1-204ENST00000476183 MITFO75030 526 aaPredicted RBP17.82■□□□□ 0.44
LIME1-204ENST00000476183 SBK2P0C263 348 aa17.82■□□□□ 0.44
LIME1-204ENST00000476183 SLC2A5P22732 501 aa17.82■□□□□ 0.44
LIME1-204ENST00000476183 ZMYND11Q15326 602 aa17.82■□□□□ 0.44
LIME1-204ENST00000476183 ASRGL1Q7L266 308 aa17.82■□□□□ 0.44
LIME1-204ENST00000476183 AMIGO2Q86SJ2 522 aa17.82■□□□□ 0.44
LIME1-204ENST00000476183 SPRYD4Q8WW59 207 aaPredicted RBP17.82■□□□□ 0.44
LIME1-204ENST00000476183 G6PC2Q9NQR9 355 aa17.82■□□□□ 0.44
LIME1-204ENST00000476183 TVP23BQ9NYZ1 205 aa17.82■□□□□ 0.44
LIME1-204ENST00000476183 TRAV20A0A0B4J274 112 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 PRODHO43272 600 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 FASP25445 335 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 PMELP40967 661 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 OPRL1P41146 370 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 CX3CR1P49238 355 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 SRP9P49458 86 aaKnown RBP17.81■□□□□ 0.44
LIME1-204ENST00000476183 BTG1P62324 171 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 GRB2P62993 217 aaKnown RBP17.81■□□□□ 0.44
LIME1-204ENST00000476183 MAB21L1Q13394 359 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 SHFQ7M4L6 423 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 MOGAT3Q86VF5 341 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 LRTOMTQ8WZ04 291 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 PLEKHA8Q96JA3 519 aa17.81■□□□□ 0.44
LIME1-204ENST00000476183 CYB5R3P00387 301 aaPredicted RBP17.8■□□□□ 0.44
LIME1-204ENST00000476183 ANPEPP15144 967 aa17.8■□□□□ 0.44
LIME1-204ENST00000476183 PCMT1P22061 227 aa17.8■□□□□ 0.44
LIME1-204ENST00000476183 EPHA2P29317 976 aa17.8■□□□□ 0.44
LIME1-204ENST00000476183 NAA10P41227 235 aaPredicted RBP17.8■□□□□ 0.44
LIME1-204ENST00000476183 SLC15A1P46059 708 aa17.8■□□□□ 0.44
LIME1-204ENST00000476183 PTGES3Q15185 160 aaKnown RBP17.8■□□□□ 0.44
LIME1-204ENST00000476183 SNAPC1Q16533 368 aa17.8■□□□□ 0.44
LIME1-204ENST00000476183 SLC35D3Q5M8T2 416 aa17.8■□□□□ 0.44
LIME1-204ENST00000476183 CXXC5Q7LFL8 322 aaKnown RBP17.8■□□□□ 0.44
LIME1-204ENST00000476183 PRSS45Q7RTY3 260 aa17.8■□□□□ 0.44
LIME1-204ENST00000476183 LRRC28Q86X40 367 aaPredicted RBP17.8■□□□□ 0.44
LIME1-204ENST00000476183 OTOSQ8NHW6 89 aa17.8■□□□□ 0.44
LIME1-204ENST00000476183 TOR3AQ9H497 397 aa17.8■□□□□ 0.44
LIME1-204ENST00000476183 KLHDC2Q9Y2U9 406 aa17.8■□□□□ 0.44
LIME1-204ENST00000476183 STAB1Q9NY15 2570 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 GGT3PA6NGU5 568 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 G3V2T6 193 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 ZNF205O95201 554 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 ANXA2P07355 339 aaKnown RBP17.79■□□□□ 0.44
LIME1-204ENST00000476183 CA6P23280 308 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 HSD11B1P28845 292 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 ESRRGP62508 458 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 APOFQ13790 326 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 TMEM155Q4W5P6 130 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 KDM4DQ6B0I6 523 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 FAHD2BQ6P2I3 314 aaPredicted RBP17.79■□□□□ 0.44
LIME1-204ENST00000476183 SPSB4Q96A44 273 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 FAHD2AQ96GK7 314 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 TEX12Q9BXU0 123 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 GABARAPL1Q9H0R8 117 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 KRT84Q9NSB2 600 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 DNAJC27Q9NZQ0 273 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 ZNF319Q9P2F9 582 aa17.79■□□□□ 0.44
LIME1-204ENST00000476183 CCDC182A6NF36 153 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 M0R129 80 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 PHF1O43189 567 aaPredicted RBP17.78■□□□□ 0.44
LIME1-204ENST00000476183 TBX1O43435 398 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 PRKYO43930 277 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 AVPP01185 164 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 LYNP07948 512 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 ZFP36P26651 326 aaKnown RBP17.78■□□□□ 0.44
LIME1-204ENST00000476183 THBS2P35442 1172 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 SRP14P37108 136 aaKnown RBP17.78■□□□□ 0.44
LIME1-204ENST00000476183 CD200P41217 278 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 GATA4P43694 442 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 RAD23AP54725 363 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 ZNF121P58317 390 aaPredicted RBP17.78■□□□□ 0.44
LIME1-204ENST00000476183 RPS7P62081 194 aaKnown RBP17.78■□□□□ 0.44
LIME1-204ENST00000476183 PRAMEF6Q5VXH4 476 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 C1orf229Q6ZS94 237 aaPredicted RBP17.78■□□□□ 0.44
LIME1-204ENST00000476183 RHOUQ7L0Q8 258 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 SPICQ8N5J4 248 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 OR56B2PQ8NGI1 322 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 THEM6Q8WUY1 208 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 DVL3Q92997 716 aaPredicted RBP17.78■□□□□ 0.44
LIME1-204ENST00000476183 SGK3Q96BR1 496 aa17.78■□□□□ 0.44
LIME1-204ENST00000476183 IFNL4K9M1U5 179 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 XRCC2O43543 280 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms