RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 SLC25A42Q86VD7 318 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 RALGPS2Q86X27 583 aaPredicted RBP3.23□□□□□ -1.89
VPS13D-207ENST00000476169 BBS7Q8IWZ6 715 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF738Q8NE65 137 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 OR52E2Q8NGJ4 325 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 PHF10Q8WUB8 498 aaKnown RBP3.23□□□□□ -1.89
VPS13D-207ENST00000476169 DNAJB3Q8WWF6 145 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 GEMIN6Q8WXD5 167 aaKnown RBP3.23□□□□□ -1.89
VPS13D-207ENST00000476169 FAM3DQ96BQ1 224 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 FAM122AQ96E09 287 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 ADTRPQ96IZ2 230 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 PSMB7Q99436 277 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 REEP1Q9H902 201 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 ISYNA1Q9NPH2 558 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 AIG1Q9NVV5 245 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 SLC25A37Q9NYZ2 338 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 CES1P1Q9UKY3 287 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 TCF20Q9UGU0 1960 aaKnown RBP3.23□□□□□ -1.89
VPS13D-207ENST00000476169 TET3O43151 1660 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 DEPDC5O75140 1603 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 EIF2AK4Q9P2K8 1649 aaKnown RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 PHF3Q92576 2039 aaKnown RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 KIF26BQ2KJY2 2108 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 CCDC144AA2RUR9 1427 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 GOLGA6L10A6NI86 522 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 ANKRD65E5RJM6 399 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 KLRC4-KLRK1H3BQV0 150 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 ERI3O43414 337 aaKnown RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 SGCEO43556 437 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 HCRTR1O43613 425 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 LYPLA1O75608 230 aaPredicted RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 ATP5HO75947 161 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 AQP8O94778 261 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 GP1BAP07359 652 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 CD37P11049 281 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 HLA-GP17693 338 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 GABRG2P18507 467 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 USF1P22415 310 aaPredicted RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 F2RP25116 425 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 MAS1LP35410 378 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 CEACAM3P40198 252 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 FABP6P51161 128 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 SLC25A1P53007 311 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 EMP2P54851 167 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 DLX1P56177 255 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 TAS2R19P59542 299 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 IRX1P78414 480 aaPredicted RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 BASP1P80723 227 aaKnown RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 PITPNAQ00169 270 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 MS4A2Q01362 244 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 ELAVL2Q12926 359 aaKnown RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF658Q5TYW1 1059 aaPredicted RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 KHDRBS2Q5VWX1 349 aaKnown RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 CLEC18BQ6UXF7 455 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 COX15Q7KZN9 410 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 HSD17B13Q7Z5P4 300 aaPredicted RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 C12orf56Q8IXR9 622 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 WDSUB1Q8N9V3 476 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 MDS2Q8NDY4 140 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 OR5AR1Q8NGP9 310 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 OR6Q1Q8NGQ2 317 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 DOK4Q8TEW6 326 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 CCDC127Q96BQ5 260 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 PPP1R14BQ96C90 147 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 C18orf12Q96KH6 178 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 LINC00479Q96M42 142 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 TSNAXQ99598 290 aaKnown RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 SH3GL3Q99963 347 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 AGMATQ9BSE5 352 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 Q9H3A6 140 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 SRMSQ9H3Y6 488 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 UCK1Q9HA47 277 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 RHBDL2Q9NX52 303 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 MAT2BQ9NZL9 334 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 EMC3Q9P0I2 261 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 XCL2Q9UBD3 114 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 TRMT112Q9UI30 125 aaKnown RBP3.22□□□□□ -1.89
VPS13D-207ENST00000476169 RAB23Q9ULC3 237 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 ASXL1Q8IXJ9 1541 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 PIK3C2BO00750 1634 aa3.22□□□□□ -1.89
VPS13D-207ENST00000476169 TRPM2O94759 1503 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 CPS1P31327 1500 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 A0A1B0GTI1 187 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 TMEM213A2RRL7 107 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ISPDA4D126 451 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 GOLGA8JA6NMD2 632 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 H7C1H1 209 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 TOX3O15405 576 aaPredicted RBP3.21□□□□□ -1.9
VPS13D-207ENST00000476169 CDC40O60508 579 aaKnown RBP eCLIP3.21□□□□□ -1.9
VPS13D-207ENST00000476169 GALR3O60755 368 aaPredicted RBP3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF780AO75290 641 aaPredicted RBP3.21□□□□□ -1.9
VPS13D-207ENST00000476169 RAB3DO95716 219 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 SNAP29O95721 258 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ACTL6AO96019 429 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 RETP07949 1114 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 GOLGA8HP0CJ92 632 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 IGFBP3P17936 291 aaPredicted RBP3.21□□□□□ -1.9
VPS13D-207ENST00000476169 CNR1P21554 472 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 COX7A1P24310 79 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 MAGEA3P43357 314 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms