RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 LMF1Q96S06 567 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 SLC6A7Q99884 636 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 ABHD6Q9BV23 337 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 NXF5Q9H1B4 397 aaKnown RBP6.1□□□□□ -1.43
UBR4-212ENST00000475973 SYT4Q9H2B2 425 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 PIGMQ9H3S5 423 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 ELOVL3Q9HB03 270 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 IFT46Q9NQC8 304 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 CYTL1Q9NRR1 136 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 GRHPRQ9UBQ7 328 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 FBXL2Q9UKC9 423 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 SLC22A13Q9Y226 551 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 VSIG4Q9Y279 399 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 B3GALT1Q9Y5Z6 326 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 R4GMQ9 66 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 CACNA1GO43497 2377 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 ITPR1Q14643 2758 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 TEX13DA0A0J9YY54 714 aaPredicted RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 TMEM218A2RU14 115 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 C9orf170A2RU37 121 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 PMS2P1A4D2B8 440 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 SYNDIG1LA6NDD5 238 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 TVP23AA6NH52 213 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 FAM171A2A8MVW0 826 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 STMND1H3BQB6 276 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 LGALS8O00214 317 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 ALOX12BO75342 701 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 SCGNO76038 276 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 RPP14O95059 124 aaKnown RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 WISP1O95388 367 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 IGLV3-1P01715 115 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 MAS1P04201 325 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 PRB1P04280 392 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 F13BP05160 661 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 FAM157CP0CG43 387 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 CTLA4P16410 223 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 CCL1P22362 96 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 PAX6P26367 422 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 RORAP35398 523 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 ALDH3B1P43353 468 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 PGDP52209 483 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 PPIAP62937 165 aaKnown RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 SORDQ00796 357 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 FLI1Q01543 452 aaPredicted RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 HHEXQ03014 270 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 PMPCAQ10713 525 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 BTN1A1Q13410 526 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 MELKQ14680 651 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 ZNF169Q14929 603 aaPredicted RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 EBPQ15125 230 aaKnown RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 INPP5JQ15735 1006 aaPredicted RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 ACKR1Q16570 336 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 HFEQ30201 348 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 SLC25A53Q5H9E4 307 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 WIPI1Q5MNZ9 446 aaPredicted RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 VAX1Q5SQQ9 334 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 PDSS1Q5T2R2 415 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 C1QL3Q5VWW1 255 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 DHRS7BQ6IAN0 325 aaPredicted RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 NDUFAF7Q7L592 441 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 MAMDC2Q7Z304 686 aaPredicted RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 ZNF546Q86UE3 836 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 LHFPL1Q86WI0 220 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 HOGA1Q86XE5 327 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 SFTPA2Q8IWL1 248 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 DMRTC2Q8IXT2 367 aaPredicted RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 PM20D2Q8IYS1 436 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 ARMC10Q8N2F6 343 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 AGBL5Q8NDL9 886 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 OR6N2Q8NGY6 317 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 GPR119Q8TDV5 335 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 DUSP19Q8WTR2 217 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 RNF133Q8WVZ7 376 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 FBXW5Q969U6 566 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 NTNG2Q96CW9 530 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 PLPPR2Q96GM1 343 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 CCDC74BQ96LY2 380 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 NPAS1Q99742 590 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 NUDT22Q9BRQ3 303 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 UQCC2Q9BRT2 126 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 RNF126Q9BV68 326 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 NUDT9Q9BW91 350 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 NMES1Q9C002 83 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 TINAGL1Q9GZM7 467 aaPredicted RBP6.09□□□□□ -1.43
UBR4-212ENST00000475973 EGLN1Q9GZT9 426 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 SLC6A15Q9H2J7 730 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 POFUT1Q9H488 388 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 FN3KRPQ9HA64 309 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 ACKR4Q9NPB9 350 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 C12orf4Q9NQ89 552 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 STARD5Q9NSY2 213 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 RAB22AQ9UL26 194 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 PLCL2Q9UPR0 1127 aa6.09□□□□□ -1.43
UBR4-212ENST00000475973 DSPP15924 2871 aaKnown RBP6.08□□□□□ -1.44
UBR4-212ENST00000475973 ARHGEF17Q96PE2 2063 aaPredicted RBP6.08□□□□□ -1.44
UBR4-212ENST00000475973 APC2O95996 2303 aa6.08□□□□□ -1.44
UBR4-212ENST00000475973 TP53BP1Q12888 1972 aaPredicted RBP6.08□□□□□ -1.44
UBR4-212ENST00000475973 TRBV23OR9-2A0A075B6M9 112 aa6.08□□□□□ -1.44
UBR4-212ENST00000475973 IGHV1OR21-1A0A087WYE8 117 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms