RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 EGLN1Q9GZT9 426 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 SLC25A32Q9H2D1 315 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 PIAS3Q9Y6X2 628 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 PIKFYVEQ9Y2I7 2098 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 SLC9B1P1A6NJY1 282 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 HMSDA8MTL9 139 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 OR5G3P0C626 314 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF888P0CJ79 500 aaPredicted RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 SMIM17P0DL12 118 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 DCDP81605 110 aaKnown RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 LSM11P83369 360 aaKnown RBP eCLIP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 MAT1AQ00266 395 aaKnown RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ENTPD8Q5MY95 495 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 DGAT2L6Q6ZPD8 337 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 SCCPDHQ8NBX0 429 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 FAM71CQ8NEG0 241 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 OR5AR1Q8NGP9 310 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 OR13C5Q8NGS8 318 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 OR13C2Q8NGS9 318 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF596Q8TC21 504 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ARRDC3Q96B67 414 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 TAF9BQ9HBM6 251 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF275Q9NSD4 429 aaPredicted RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 RFPL4AA6NLU0 287 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 RFPL4AL1F8VTS6 287 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 TAAR5O14804 337 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 HIST1H1TP22492 207 aaPredicted RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 S100A4P26447 101 aaKnown RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 CDK5Q00535 292 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 GGTA1PQ4G0N0 100 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 DHRS7BQ6IAN0 325 aaPredicted RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 TCTN3Q6NUS6 607 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 OR52R1Q8NGF1 315 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 RXFP4Q8TDU9 374 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 GPR119Q8TDV5 335 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 IL17CQ9P0M4 197 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 RAB22AQ9UL26 194 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 PRSS21Q9Y6M0 314 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 PTPRDP23468 1912 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF133P52736 654 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 SLC25A35Q3KQZ1 300 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 SCD5Q86SK9 330 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 SMIM12Q96EX1 92 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 FOXN4Q96NZ1 517 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 TMEM38AQ9H6F2 299 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 ACSS1Q9NUB1 689 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 DHCR7Q9UBM7 475 aaKnown RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 GPR55Q9Y2T6 319 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 GALR2O43603 387 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 OR2J3O76001 311 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 AQP8O94778 261 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 RNF224P0DH78 156 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 UBE2IP63279 158 aaKnown RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 PHLDA2Q53GA4 152 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 MANEAQ5SRI9 462 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 GLDNQ6ZMI3 551 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 RBM45Q8IUH3 476 aaKnown RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 SP7Q8TDD2 431 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 WFDC6Q9BQY6 131 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 GNB4Q9HAV0 340 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 BCO1Q9HAY6 547 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 A0A0G2JK05 382 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 A0A0G2JLL6 359 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF814B7Z6K7 855 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 AQP7O14520 342 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 PRF1P14222 555 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 C21orf58P58505 322 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 OR2B8PP59922 312 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 OR8B8Q15620 311 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 PRRT2Q7Z6L0 340 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 PPP1R3BQ86XI6 285 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 MEX3DQ86XN8 651 aaKnown RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 OR2A1Q8NGT9 310 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 FIBINQ8TAL6 211 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 ORAI1Q96D31 301 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 GPA33Q99795 319 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 MENTQ9BUN1 341 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 OPN4Q9UHM6 478 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 AQP7P3A6NL99 342 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 UMAD1C9J7I0 102 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 K7ERQ8 282 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 BMPR1BO00238 502 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 OR7C2O60412 319 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 F2P00734 622 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 STAG3L2P0CL84 134 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 CD96P40200 585 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 TNFRSF4P43489 277 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 EDDM3AQ14507 147 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF385BQ569K4 471 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 SHISA6Q6ZSJ9 500 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 CMBLQ96DG6 245 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 SLC46A1Q96NT5 459 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 PLA2G12AQ9BZM1 189 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 OR51I2Q9H344 312 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 LYRM2Q9NU23 88 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 NECAP2Q9NVZ3 263 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 B3GALT5Q9Y2C3 310 aa10.48□□□□□ -0.73
U2AF1-209ENST00000475639 SIRT4Q9Y6E7 314 aaPredicted RBP10.48□□□□□ -0.73
U2AF1-209ENST00000475639 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms