RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 TNFSF11O14788 317 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 CER1O95813 267 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 ZNF93P35789 620 aaPredicted RBP12.44□□□□□ -0.42
UBXN11-214ENST00000475591 RAP2BP61225 183 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 SSBP1Q04837 148 aaKnown RBP12.44□□□□□ -0.42
UBXN11-214ENST00000475591 ZNF529Q6P280 563 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 TMEM81Q6P7N7 255 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 TRAPPC6BQ86SZ2 158 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 LRRC18Q8N456 261 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 BPIFB2Q8N4F0 458 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 TMEM104Q8NE00 496 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 PAQR8Q8TEZ7 354 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 CLEC4MQ9H2X3 399 aaPredicted RBP12.44□□□□□ -0.42
UBXN11-214ENST00000475591 SCPEP1Q9HB40 452 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 B3GNT2Q9NY97 397 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 OPN4Q9UHM6 478 aa12.44□□□□□ -0.42
UBXN11-214ENST00000475591 TMEM82A0PJX8 343 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 M0R233 179 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 CYC1P08574 325 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 RAB6AP20340 208 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 OR3A4PP47883 348 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 ZNF239Q16600 458 aaKnown RBP12.43□□□□□ -0.42
UBXN11-214ENST00000475591 ZNF584Q8IVC4 421 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 C1orf210Q8IVY1 113 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 OR13C8Q8NGS7 320 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 M1APQ8TC57 530 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 ZNF837Q96EG3 531 aaPredicted RBP12.43□□□□□ -0.42
UBXN11-214ENST00000475591 LIN37Q96GY3 246 aaPredicted RBP12.43□□□□□ -0.42
UBXN11-214ENST00000475591 HPF1Q9NWY4 346 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 A0A0A6YYD4 124 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 A0A0J9YW62 118 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 OR5H15A6NDH6 313 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 METTL21EPA6NDL7 271 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 PMS2P2O95744 297 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 FOLR3P41439 243 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 CSNK1A1P48729 337 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 OPCMLQ14982 345 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 CLPPQ16740 277 aaPredicted RBP12.43□□□□□ -0.42
UBXN11-214ENST00000475591 ATPAF1Q5TC12 328 aaPredicted RBP12.43□□□□□ -0.42
UBXN11-214ENST00000475591 ZNF101Q8IZC7 436 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 PTX4Q96A99 478 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 SRXN1Q9BYN0 137 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 SELENOIQ9C0D9 397 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 SH2D2AQ9NP31 389 aa12.43□□□□□ -0.42
UBXN11-214ENST00000475591 RPS10-NUDT3A0A1W2PQS6 291 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 RGS11O94810 467 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 BPNT1O95861 308 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 CD63P08962 238 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 OR4E1P0C645 316 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 OTX2P32243 289 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 DUSP3P51452 185 aaPredicted RBP12.42□□□□□ -0.42
UBXN11-214ENST00000475591 DSCR4P56555 118 aaPredicted RBP12.42□□□□□ -0.42
UBXN11-214ENST00000475591 MLF1P58340 268 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 Q0VFX4 171 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 TRA2AQ13595 282 aaKnown RBP eCLIP12.42□□□□□ -0.42
UBXN11-214ENST00000475591 SFRP5Q5T4F7 317 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 GLIPR1L1Q6UWM5 242 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 FAM109AQ8N4B1 249 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 DEFB123Q8N688 67 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 NPRL2Q8WTW4 380 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 PNPLA2Q96AD5 504 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 BANF2Q9H503 90 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 A0A0A6YYH2 397 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 A6NJ64 397 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 F5H5K5 113 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 ARPC5O15511 151 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 F10P00742 488 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 CD74P04233 296 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 ZXDAP98168 799 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 DHODHQ02127 395 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 ENDOGQ14249 297 aaKnown RBP12.42□□□□□ -0.42
UBXN11-214ENST00000475591 KCNMB1Q16558 191 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 C11orf88Q6PI97 169 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 HDDC2Q7Z4H3 204 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 YRDCQ86U90 279 aaKnown RBP12.42□□□□□ -0.42
UBXN11-214ENST00000475591 MRGPRFQ96AM1 343 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 LYZL4Q96KX0 146 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 UQCC2Q9BRT2 126 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 MOB1AQ9H8S9 216 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 ZNF230Q9UIE0 474 aaPredicted RBP12.42□□□□□ -0.42
UBXN11-214ENST00000475591 VSIG4Q9Y279 399 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 RTTNQ86VV8 2226 aa12.42□□□□□ -0.42
UBXN11-214ENST00000475591 FXYD6-FXYD2A0A087WZ82 144 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 A0A087WZY1 265 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 IGKV1-9A0A0C4DH69 117 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 LOC102725191A0A1B0GVB3 256 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 TMEM14DPA8MWL7 114 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 MCRIP1C9JLW8 97 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 NPIPA2E9PIF3 369 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 F5H5P2 479 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 NPIPA3F8WFD2 350 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 L7N2F9 121 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 HCKP08631 526 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 NFYAP23511 347 aaPredicted RBP12.41□□□□□ -0.42
UBXN11-214ENST00000475591 OR9K2Q8NGE7 335 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 OR5D18Q8NGL1 313 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 RADILQ96JH8 1075 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 C1orf147Q96MC9 270 aaPredicted RBP12.41□□□□□ -0.42
UBXN11-214ENST00000475591 SFXN2Q96NB2 322 aa12.41□□□□□ -0.42
UBXN11-214ENST00000475591 RBM24Q9BX46 236 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms