RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TRAP1Q12931 704 aaKnown RBP16.87■□□□□ 0.29
VPS36-203ENST00000475375 BEAN1Q3B7T3 259 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 CFAP77Q6ZQR2 320 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 ATF6BQ99941 703 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 TMEM120AQ9BXJ8 343 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 SLC22A4Q9H015 551 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 NRIP3Q9NQ35 241 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 INTS9Q9NV88 658 aaKnown RBP16.87■□□□□ 0.29
VPS36-203ENST00000475375 AURKCQ9UQB9 309 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 A0A1B0GVI7 797 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 ANKRD61A6NGH8 418 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 ECDO95905 644 aaPredicted RBP16.86■□□□□ 0.29
VPS36-203ENST00000475375 GRPP07492 148 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 GGT2P36268 569 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 MDH1P40925 334 aaKnown RBP16.86■□□□□ 0.29
VPS36-203ENST00000475375 CDKN2AP42771 156 aaKnown RBP16.86■□□□□ 0.29
VPS36-203ENST00000475375 RPS6KA3P51812 740 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 ECH1Q13011 328 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 FAM189A2Q15884 450 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 IFI44LQ53G44 452 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 METTL21CQ5VZV1 264 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 Q6ZTK2 550 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 FKBP9P1Q75LS8 142 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 NAA40Q86UY6 237 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 CYP4Z1Q86W10 505 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 OR2AJ1Q8NGZ0 328 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 CNTD2Q9H8S5 307 aa16.86■□□□□ 0.29
VPS36-203ENST00000475375 SRA1Q9HD15 236 aaKnown RBP16.86■□□□□ 0.29
VPS36-203ENST00000475375 IGHV3OR15-7A0A075B7D8 119 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 GGT3PA6NGU5 568 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 CD300LBA8K4G0 201 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 BBIP1A8MTZ0 92 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 DCTN6O00399 190 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 GMDSO60547 372 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 PTP4A3O75365 173 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 TSPAN9O75954 239 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 TGFBR2P37173 567 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 CDONQ4KMG0 1287 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 COQ5Q5HYK3 327 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 Q6ZPA2 131 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 RSRC1Q96IZ7 334 aaKnown RBP16.85■□□□□ 0.29
VPS36-203ENST00000475375 GPX7Q96SL4 187 aaPredicted RBP16.85■□□□□ 0.29
VPS36-203ENST00000475375 GID8Q9NWU2 228 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 DNAJB11Q9UBS4 358 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 RPUSD1Q9UJJ7 312 aaKnown RBP16.85■□□□□ 0.29
VPS36-203ENST00000475375 SIGLEC7Q9Y286 467 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 KPTNQ9Y664 436 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 TET2Q6N021 2002 aaPredicted RBP16.85■□□□□ 0.29
VPS36-203ENST00000475375 NBEAL2Q6ZNJ1 2754 aa16.85■□□□□ 0.29
VPS36-203ENST00000475375 A0A1W2PRD5 423 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 A0A1W2PRF3 423 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 A0A1W2PRM7 423 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 PAHP00439 452 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 EEF1B2P24534 225 aaKnown RBP16.84■□□□□ 0.29
VPS36-203ENST00000475375 TPTEP56180 551 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 KRTAP27-1Q3LI81 207 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 FGD3Q5JSP0 725 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 SLC18B1Q6NT16 456 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 DPY19L2P2Q6ZN68 376 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 ZNF826PQ6ZT77 177 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 FAM90A1Q86YD7 464 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 PLPP7Q8NBV4 271 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 ATP6V1G3Q96LB4 118 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 SIRT7Q9NRC8 400 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 ZNRD1Q9P1U0 126 aa16.84■□□□□ 0.29
VPS36-203ENST00000475375 IGLV1-36A0A0B4J1U3 117 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 GSTA4O15217 222 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 HLA-DQA2P01906 255 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 OPN1MWP04001 364 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 OPN1MW2P0DN77 364 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 OPN1MW3P0DN78 364 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 GABRA5P31644 462 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 PRB3Q04118 309 aaPredicted RBP16.83■□□□□ 0.28
VPS36-203ENST00000475375 DBPQ10586 325 aaPredicted RBP16.83■□□□□ 0.28
VPS36-203ENST00000475375 C11orf91Q3C1V1 193 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 SLC36A3Q495N2 470 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 CMTM4Q8IZR5 234 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 OR6V1Q8N148 313 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 LNX2Q8N448 690 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 GALNT4Q8N4A0 578 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 SLC26A10Q8NG04 563 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 SLC7A13Q8TCU3 470 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 HSH2DQ96JZ2 352 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 ERMAPQ96PL5 475 aaPredicted RBP16.83■□□□□ 0.28
VPS36-203ENST00000475375 SIKE1Q9BRV8 207 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 PPA2Q9H2U2 334 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 ANKRD19PQ9H560 264 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 B9D1Q9UPM9 204 aa16.83■□□□□ 0.28
VPS36-203ENST00000475375 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.82■□□□□ 0.28
VPS36-203ENST00000475375 LOC100653049A0A140TA62 436 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 M0R135 149 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 FCN3O75636 299 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 KRT34O76011 436 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 PPP1R3DO95685 299 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 RENP00797 406 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 GUCA2AQ02747 115 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 HERPUD1Q15011 391 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 MAPRE2Q15555 327 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 SLC35E4Q6ICL7 350 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 REC114Q7Z4M0 266 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms