RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 SMN1Q16637 294 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 SPANXN3Q5MJ09 141 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 DGAT2L7PQ6IED9 249 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 ZNF770Q6IQ21 691 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 CCDC144NLQ6NUI1 221 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 TEX38Q6PEX7 206 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 GJB7Q6PEY0 223 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 MON1BQ7L1V2 547 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 LINC00346Q8IVM7 164 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 C1orf210Q8IVY1 113 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 C9orf40Q8IXQ3 194 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 BOD1L2Q8IYS8 172 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 BATF2Q8N1L9 274 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 GBGT1Q8N5D6 347 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 OR4A4PQ8NGN8 299 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 OR51Q1Q8NH59 317 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 SUN3Q8TAQ9 357 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 LRRC15Q8TF66 581 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 ABHD5Q8WTS1 349 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 DNAJB3Q8WWF6 145 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 TMEM18Q96B42 140 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 MOB3AQ96BX8 217 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 GPR146Q96CH1 333 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 RAB39BQ96DA2 213 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 SMIM10Q96HG1 83 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 THOC3Q96J01 351 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 FER1L6-AS2Q96M78 137 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 GUCD1Q96NT3 240 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 RHNO1Q9BSD3 238 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 SGPP1Q9BX95 441 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 RAB11FIP5Q9BXF6 653 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 SPATC1LQ9H0A9 340 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 WDR54Q9H977 334 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 LTB4R2Q9NPC1 389 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 SLC17A5Q9NRA2 495 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 FGF21Q9NSA1 209 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 GPATCH2LQ9NWQ4 482 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 TXNL4BQ9NX01 149 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 TAS2R5Q9NYW4 299 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 FLRT1Q9NZU1 646 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 MRPL27Q9P0M9 148 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 FBXO4Q9UKT5 387 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 RNF150Q9ULK6 438 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 HDGFL3Q9Y3E1 203 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 STRAPQ9Y3F4 350 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 ADAMTSL1Q8N6G6 1762 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 A0A087WWC5 75 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 WDR27A2RRH5 827 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 C4orf47A7E2U8 309 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 F8WDY8 70 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 TNFRSF11BO00300 401 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 RBFOX2O43251 390 aaKnown RBP eCLIP5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 ZNF208O43345 1280 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 TPST2O60704 377 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 TNFSF13O75888 250 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 OR2C1O95371 312 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 SEMG1P04279 462 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 OR5H8P0DN80 308 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 CD37P11049 281 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 SLC25A4P12235 298 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 TPT1P13693 172 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 NCK1P16333 377 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 CD22P20273 847 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 IMPA1P29218 277 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 FGF9P31371 208 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 OTX2P32243 289 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 SNCAP37840 140 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 RPL3P39023 403 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 MPLP40238 635 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 POLR2HP52434 150 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 TBPL1P62380 186 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 AKR1C1Q04828 323 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 ZNF763Q0D2J5 394 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 ELAVL1Q15717 326 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 CSRP2Q16527 193 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 PRSS8Q16651 343 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 TMEM183BQ1AE95 376 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 SNAI3Q3KNW1 292 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 DUSP28Q4G0W2 176 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 IFI44LQ53G44 452 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 XKR7Q5GH72 579 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 PRAMEF17Q5VTA0 474 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 FAAP20Q6NZ36 180 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 RTN4RL2Q86UN3 420 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 APOBEC3FQ8IUX4 373 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 ZDHHC21Q8IVQ6 265 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 C4orf19Q8IY42 314 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 PLPP5Q8NEB5 264 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 OR52L2PQ8NGH6 319 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 RAB40AQ8WXH6 277 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 FAM46BQ96A09 425 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 DNAJC19Q96DA6 116 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 KTI12Q96EK9 354 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 MRAP2Q96G30 205 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 IL17FQ96PD4 163 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 TRIB1Q96RU8 372 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 ABHD1Q96SE0 405 aa5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 MRPL57Q9BQC6 102 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-215ENST00000475319 ALG12Q9BV10 488 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms