RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 EIF3HO15372 352 aaKnown RBP eCLIP2.5□□□□□ -2.01
SDHB-204ENST00000475049 NUPL2O15504 423 aaKnown RBP2.5□□□□□ -2.01
SDHB-204ENST00000475049 KLHL41O60662 606 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 RDH16O75452 317 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 H6PDO95479 791 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 OR5H8P0DN80 308 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 WARSP23381 471 aaKnown RBP2.5□□□□□ -2.01
SDHB-204ENST00000475049 SYKP43405 635 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 RWDD2BP57060 319 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 VSX2P58304 361 aaPredicted RBP2.5□□□□□ -2.01
SDHB-204ENST00000475049 RAB10P61026 200 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 STXBP1P61764 594 aaKnown RBP2.5□□□□□ -2.01
SDHB-204ENST00000475049 BEX3Q00994 111 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 CUL2Q13617 745 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 SF3A2Q15428 464 aaKnown RBP2.5□□□□□ -2.01
SDHB-204ENST00000475049 HSP90B2PQ58FF3 399 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 C22orf42Q6IC83 251 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 PLET1Q6UQ28 207 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 IGFL3Q6UXB1 125 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 MBOAT1Q6ZNC8 495 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 ABHD12BQ7Z5M8 362 aaPredicted RBP2.5□□□□□ -2.01
SDHB-204ENST00000475049 C10orf67Q8IYJ2 551 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 IQCKQ8N0W5 287 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 ZFP41Q8N8Y5 198 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 OR10J6PQ8NGY7 276 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 EEF1AKMT3Q96AZ1 226 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 CHP1Q99653 195 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 MICU1Q9BPX6 476 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 CHAC1Q9BUX1 264 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 RACGAP1Q9H0H5 632 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 NEK6Q9HC98 313 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 BATF3Q9NR55 127 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 LGALS13Q9UHV8 139 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 ZFYVE26Q68DK2 2539 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 TROQ12816 1431 aaPredicted RBP2.5□□□□□ -2.01
SDHB-204ENST00000475049 ROCK1Q13464 1354 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 TRPM3Q9HCF6 1732 aaPredicted RBP2.49□□□□□ -2.01
SDHB-204ENST00000475049 A0A075B6Q4 140 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 TRBV11-1A0A0K0K1C0 115 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 A0A1B0GVX0 72 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 LYRM9A8MSI8 78 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 FKBP6O75344 327 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 KRT14P02533 472 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 MRPL3P09001 348 aaKnown RBP2.49□□□□□ -2.01
SDHB-204ENST00000475049 RHOXF2BP0C7M4 288 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 UBTFL6P0CB48 400 aaPredicted RBP2.49□□□□□ -2.01
SDHB-204ENST00000475049 IGFBP3P17936 291 aaPredicted RBP2.49□□□□□ -2.01
SDHB-204ENST00000475049 GGT1P19440 569 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 GTF2E2P29084 291 aaKnown RBP2.49□□□□□ -2.01
SDHB-204ENST00000475049 CX3CR1P49238 355 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 RND2P52198 227 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 ZNF138P52744 262 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 C21orf59P57076 290 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 TMED1Q13445 227 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 EIF4EBP1Q13541 118 aaPredicted RBP2.49□□□□□ -2.01
SDHB-204ENST00000475049 OR7A5Q15622 319 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 STK11Q15831 433 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 SNRNP35Q16560 246 aaKnown RBP2.49□□□□□ -2.01
SDHB-204ENST00000475049 ALKBH6Q3KRA9 238 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 METTL21CQ5VZV1 264 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 DUX4L9Q6RFH8 374 aaPredicted RBP2.49□□□□□ -2.01
SDHB-204ENST00000475049 CMC1Q7Z7K0 106 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 TMEM150AQ86TG1 271 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 ZNF695Q8IW36 515 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 RIMKLAQ8IXN7 391 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 OR2A1Q8NGT9 310 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 UBALD1Q8TB05 177 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 ABHD3Q8WU67 409 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 CAPSLQ8WWF8 208 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 NTAN1Q96AB6 310 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 MCUR1Q96AQ8 359 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 RPP21Q9H633 154 aaKnown RBP2.49□□□□□ -2.01
SDHB-204ENST00000475049 TMEM185BQ9H7F4 350 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 HMG20AQ9NP66 347 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 NECAP2Q9NVZ3 263 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 XIRP2A4UGR9 3374 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 GCC2Q8IWJ2 1684 aa2.49□□□□□ -2.01
SDHB-204ENST00000475049 HELZ2Q9BYK8 2649 aaKnown RBP2.49□□□□□ -2.01
SDHB-204ENST00000475049 COL4A6Q14031 1691 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 WNK3Q9BYP7 1800 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 IGHV5-10-1A0A0J9YXX1 117 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 GOLGA6L19H0YKK7 550 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 SGK1O00141 431 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 CDH16O75309 829 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 HMMRO75330 724 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 VAMP5O95183 116 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 IGHV1-8P0DP01 117 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 MYL2P10916 166 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 PSMC3P17980 439 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 GPX4P36969 197 aaPredicted RBP2.48□□□□□ -2.01
SDHB-204ENST00000475049 PEX19P40855 299 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 UBE2NP61088 152 aaKnown RBP2.48□□□□□ -2.01
SDHB-204ENST00000475049 SELENBP1Q13228 472 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 PSMD5Q16401 504 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 FAM78AQ5JUQ0 283 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 SPANXN2Q5MJ10 180 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 KHDRBS2Q5VWX1 349 aaKnown RBP2.48□□□□□ -2.01
SDHB-204ENST00000475049 FBXW9Q5XUX1 488 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 TTC23LQ6PF05 361 aa2.48□□□□□ -2.01
SDHB-204ENST00000475049 CEMP1Q6PRD7 247 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms