RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ZNF92Q03936 586 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 RAB40BQ12829 278 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 POU4F2Q12837 409 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 PSG7Q13046 419 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 GK2Q14410 553 aaPredicted RBP5.97□□□□□ -1.45
LIMD1-204ENST00000474665 SNCBQ16143 134 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 GLYATL3Q5SZD4 288 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 SHEQ5VZ18 495 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 MBNL2Q5VZF2 373 aaKnown RBP5.97□□□□□ -1.45
LIMD1-204ENST00000474665 DRAM2Q6UX65 266 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 FBXW12Q6X9E4 464 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 C20orf204Q6ZNR8 217 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 LHFPL3Q86UP9 236 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF679Q8IYX0 411 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 MUC15Q8N387 334 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 ACBD7Q8N6N7 88 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF485Q8NCK3 441 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 SETD9Q8NE22 299 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 OR1J1Q8NGS3 322 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 OR2AE1Q8NHA4 323 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 IPCEF1Q8WWN9 437 aaPredicted RBP5.97□□□□□ -1.45
LIMD1-204ENST00000474665 ASB17Q8WXJ9 295 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 RORBQ92753 470 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 APOBEC3DQ96AK3 386 aaPredicted RBP5.97□□□□□ -1.45
LIMD1-204ENST00000474665 SGK3Q96BR1 496 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 LYZL4Q96KX0 146 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 Q96MF0 132 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 Q96MT0 163 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 DCLRE1CQ96SD1 692 aaKnown RBP5.97□□□□□ -1.45
LIMD1-204ENST00000474665 MNTQ99583 582 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF184Q99676 751 aaPredicted RBP5.97□□□□□ -1.45
LIMD1-204ENST00000474665 KCNS3Q9BQ31 491 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 SYT3Q9BQG1 590 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 JAM3Q9BX67 310 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 VCX3BQ9H321 246 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 ISG20L2Q9H9L3 353 aaKnown RBP5.97□□□□□ -1.45
LIMD1-204ENST00000474665 G6PC2Q9NQR9 355 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 CBLN4Q9NTU7 201 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF701Q9NV72 531 aaPredicted RBP5.97□□□□□ -1.45
LIMD1-204ENST00000474665 ERVK13-1Q9NX77 482 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 CLEC2DQ9UHP7 191 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 PSORS1C1Q9UIG5 152 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 RAB26Q9ULW5 256 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 LAMP3Q9UQV4 416 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 RPL36Q9Y3U8 105 aaKnown RBP5.97□□□□□ -1.45
LIMD1-204ENST00000474665 NOTCH1P46531 2555 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 ZSCAN5BA6NJL1 495 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 E9PI62 339 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF670-ZNF695F2Z2N8 137 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 SLC1A7O00341 560 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 SULT1C4O75897 302 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 LALBAP00709 142 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 IGLV3-1P01715 115 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 IGHV3-13P01766 116 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 LCATP04180 440 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 HTR1AP08908 422 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 H2BFMP0C1H6 154 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 PAX1P15863 534 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 DCTDP32321 178 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 ATP6V1E1P36543 226 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 RBMXP38159 391 aaKnown RBP5.96□□□□□ -1.46
LIMD1-204ENST00000474665 ALDH3B1P43353 468 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 SLC6A9P48067 706 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 HSPA13P48723 471 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 RGS6P49758 472 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 MMP15P51511 669 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 MMP16P51512 607 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 TPTEP56180 551 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 NANOS3P60323 173 aaKnown RBP5.96□□□□□ -1.46
LIMD1-204ENST00000474665 PSMA6P60900 246 aaKnown RBP5.96□□□□□ -1.46
LIMD1-204ENST00000474665 GRB2P62993 217 aaKnown RBP5.96□□□□□ -1.46
LIMD1-204ENST00000474665 EGR3Q06889 387 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 ST3GAL4Q11206 333 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 HNRNPA0Q13151 305 aaKnown RBP5.96□□□□□ -1.46
LIMD1-204ENST00000474665 GALEQ14376 348 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 CDONQ4KMG0 1287 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 TP53I3Q53FA7 332 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 SPRNQ5BIV9 151 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 Q5PR19 223 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 LIPNQ5VXI9 398 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 XAF1Q6GPH4 301 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 RGS7BPQ6MZT1 257 aaPredicted RBP5.96□□□□□ -1.46
LIMD1-204ENST00000474665 DEGS2Q6QHC5 323 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 Q6ZR03 302 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 FAM57BQ71RH2 274 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 KRT77Q7Z794 578 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 FBXL14Q8N1E6 418 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 PRSS35Q8N3Z0 413 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF283Q8N7M2 679 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 BPIFB6Q8NFQ5 453 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 OR8B12Q8NGG6 310 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 SPTSSAQ969W0 71 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 SPSB4Q96A44 273 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 HAVCR1Q96D42 359 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 CMBLQ96DG6 245 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 PELI1Q96FA3 418 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 C19orf24Q9BVV8 132 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 BCL2L14Q9BZR8 327 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 DUSP21Q9H596 190 aa5.96□□□□□ -1.46
LIMD1-204ENST00000474665 PPP1R3EQ9H7J1 279 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms