RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 GABRA5P31644 462 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 GLRXP35754 106 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 NXPH1P58417 271 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 NTHL1P78549 312 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 C4orf26Q17RF5 130 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ATP6AP1LQ52LC2 224 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 KHDC3LQ587J8 217 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 FAM162BQ5T6X4 162 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 LCTLQ6UWM7 567 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 PAMR1Q6UXH9 720 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ZNF66Q6ZN08 573 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 PRSS48Q7RTY5 328 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 RNF144BQ7Z419 303 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 WDR53Q7Z5U6 358 aaPredicted RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 NIT1Q86X76 327 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 LRRC25Q8N386 305 aaPredicted RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 BPIFB2Q8N4F0 458 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 CBR4Q8N4T8 237 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 CHST4Q8NCG5 386 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 GPR32P1Q8NGA4 272 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 OR10Q1Q8NGQ4 319 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 FNDC9Q8TBE3 224 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 MRPS31Q92665 395 aaKnown RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 SARAFQ96BY9 339 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 RDH12Q96NR8 316 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 CBWD1Q9BRT8 395 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 GTSF1LQ9H1H1 148 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ZBTB20Q9HC78 741 aaPredicted RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 UBIAD1Q9Y5Z9 338 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 SAMD9Q5K651 1589 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ITSN2Q9NZM3 1697 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 MROH1Q8NDA8 1641 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 MYH14Q7Z406 1995 aaKnown RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 J3KR12 359 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 KIR2DS3K7RE56 304 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 CD160O95971 181 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 HLA-AP01891 365 aaKnown RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 ADCYAP1P18509 176 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 PRTN3P24158 256 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 XCR1P46094 333 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 AQP5P55064 265 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 WNT3AP56704 352 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 PRR5P85299 388 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ZXDAP98168 799 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 PSG4Q00888 419 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 C1orf61Q13536 156 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 KIR2DS3Q14952 304 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 OTUD3Q5T2D3 398 aaPredicted RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 APRG1Q8IVJ8 170 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 HIST3H2BBQ8N257 126 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ZNF614Q8N883 585 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 OR13G1Q8NGZ3 307 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 LMO3Q8TAP4 145 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ZNF519Q8TB69 540 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ASB13Q8WXK3 278 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ART4Q93070 314 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 SCRN2Q96FV2 425 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 AJUBAQ96IF1 538 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 LOXL4Q96JB6 756 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 TSSK2Q96PF2 358 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 DUX3Q96PT4 197 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ZNF649Q9BS31 505 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 GATA5Q9BWX5 397 aaPredicted RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 CIPCQ9C0C6 399 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 FNDC4Q9H6D8 234 aaPredicted RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 SFXN1Q9H9B4 322 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 NOX4Q9NPH5 578 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 OR1A1Q9P1Q5 309 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 RIMS3Q9UJD0 308 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ING1Q9UK53 422 aaPredicted RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 CARHSP1Q9Y2V2 147 aaKnown RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 RBM8AQ9Y5S9 174 aaKnown RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 RGS12O14924 1447 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 LTN1O94822 1766 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 KNDC1Q76NI1 1749 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ABCA3Q99758 1704 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 A0A0J9YY10 115 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 A0A1B0GX78 115 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 SERINC4A6NH21 518 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 SLC22A20A6NK97 555 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 CLDN24A6NM45 220 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 TSPAN15O95858 294 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 MT-ND4LP03901 98 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 P04436 131 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 HIST1H1CP16403 213 aaKnown RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 GPR6P46095 362 aaPredicted RBP3.07□□□□□ -1.92
UBR3-208ENST00000474426 IER3P46695 156 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 S100A10P60903 97 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 RHOBP62745 196 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 PAFAH1B2P68402 229 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 SIRPAP78324 504 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 PRKCDQ05655 676 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 MS4A18Q3C1V0 323 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 OR10J3Q5JRS4 329 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 FAM182AQ5T1J6 154 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 C1orf194Q5T5A4 169 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 XAF1Q6GPH4 301 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 AADACL2Q6P093 401 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ALKAL2Q6UX46 152 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 Q6ZT83 130 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms