RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 N6AMT1Q9Y5N5 214 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 A0A1B0GWJ7 208 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 PRR32B1ATL7 298 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 LYNP07948 512 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 HSD11B1P28845 292 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 SLC15A1P46059 708 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 GZMKP49863 264 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 MVKQ03426 396 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 HFEQ30201 348 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 PGAP1Q75T13 922 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 SLC16A9Q7RTY1 509 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 ZNF454Q8N9F8 522 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 THEM6Q8WUY1 208 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 CCL17Q92583 94 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 ZNF582Q96NG8 517 aaPredicted RBP16.02■□□□□ 0.16
PTCD3-210ENST00000473829 OR2V2Q96R30 315 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 TOR3AQ9H497 397 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 ENOPH1Q9UHY7 261 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 WIPI2Q9Y4P8 454 aa16.02■□□□□ 0.16
PTCD3-210ENST00000473829 A8MV72 311 aaPredicted RBP16.01■□□□□ 0.15
PTCD3-210ENST00000473829 CLDN25C9JDP6 229 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 ALOX5APP20292 161 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 ZNF121P58317 390 aaPredicted RBP16.01■□□□□ 0.15
PTCD3-210ENST00000473829 LCN1P1Q5VSP4 162 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 NXNL2Q5VZ03 156 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 LRRN1Q6UXK5 716 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 RHOUQ7L0Q8 258 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 RFLNBQ8N5W9 214 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 OR13G1Q8NGZ3 307 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 HPS1Q92902 700 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 REPIN1Q9BWE0 567 aaKnown RBP16.01■□□□□ 0.15
PTCD3-210ENST00000473829 USE1Q9NZ43 259 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 ZNF319Q9P2F9 582 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 IL19Q9UHD0 177 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 COPS3Q9UNS2 423 aa16.01■□□□□ 0.15
PTCD3-210ENST00000473829 IGHV3-64DA0A0J9YX35 117 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 CD300LBA8K4G0 201 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 F5H5P2 479 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 TBX1O43435 398 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 HLA-DPB1P04440 258 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 ANXA2P07355 339 aaKnown RBP16■□□□□ 0.15
PTCD3-210ENST00000473829 H2BFMP0C1H6 154 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 SELEP16581 610 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 TNFSF4P23510 183 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 FAM57BQ71RH2 274 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 MEPCEQ7L2J0 689 aaKnown RBP16■□□□□ 0.15
PTCD3-210ENST00000473829 CBR4Q8N4T8 237 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 SPSB4Q96A44 273 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 C1orf159Q96HA4 380 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 MEGF10Q96KG7 1140 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 TTTY10Q9BZA0 68 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 YIPF3Q9GZM5 350 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 BRD7Q9NPI1 651 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 LAMP5Q9UJQ1 280 aa16■□□□□ 0.15
PTCD3-210ENST00000473829 LOC100289279A0A1B0GTE1 492 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 FAM157AC9JC47 383 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 E9PQ18 207 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 PSMD9O00233 223 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 ALDH3A2P51648 485 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 LMO4P61968 165 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 PQLC1Q8N2U9 271 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 SPRYD4Q8WW59 207 aaPredicted RBP15.99■□□□□ 0.15
PTCD3-210ENST00000473829 CNN2Q99439 309 aaKnown RBP15.99■□□□□ 0.15
PTCD3-210ENST00000473829 ADGRL4Q9HBW9 690 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 TMEM106BQ9NUM4 274 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 TMEM100Q9NV29 134 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 LRP12Q9Y561 859 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 CUBNO60494 3623 aa15.99■□□□□ 0.15
PTCD3-210ENST00000473829 XRCC2O43543 280 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 CRLF1O75462 422 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 TNFRSF1AP19438 455 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 MMP16P51512 607 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 CDH15P55291 814 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 ZIK1Q3SY52 487 aaPredicted RBP15.98■□□□□ 0.15
PTCD3-210ENST00000473829 FAM166AQ6J272 317 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 C10orf67Q8IYJ2 551 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 OR56B2PQ8NGI1 322 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 DVL3Q92997 716 aaPredicted RBP15.98■□□□□ 0.15
PTCD3-210ENST00000473829 UBE2FQ969M7 185 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 SGK3Q96BR1 496 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 SIGLEC11Q96RL6 698 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 MBOAT4Q96T53 435 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 SLC29A1Q99808 456 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 GCM1Q9NP62 436 aa15.98■□□□□ 0.15
PTCD3-210ENST00000473829 hCG_38984A0A1B0GV85 526 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 GGT3PA6NGU5 568 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 SLC22A31A6NKX4 558 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 TGFAP01135 160 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 CA6P23280 308 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 PSMA6P60900 246 aaKnown RBP15.97■□□□□ 0.15
PTCD3-210ENST00000473829 FAM3AP98173 230 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 MAB21L1Q13394 359 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 GFOD2Q3B7J2 385 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 ZNF771Q7L3S4 317 aaPredicted RBP15.97■□□□□ 0.15
PTCD3-210ENST00000473829 KRT77Q7Z794 578 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.97■□□□□ 0.15
PTCD3-210ENST00000473829 GID4Q8IVV7 300 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 ZNF420Q8TAQ5 688 aaPredicted RBP15.97■□□□□ 0.15
PTCD3-210ENST00000473829 FAM81AQ8TBF8 368 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 RAB1CQ92928 201 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms