RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 ATP5HO75947 161 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 HLA-DPB1P04440 258 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 SLC15A1P46059 708 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 ZNF92Q03936 586 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 ZMYND11Q15326 602 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 GLYATL3Q5SZD4 288 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 SPATC1Q76KD6 591 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 LRRC28Q86X40 367 aaPredicted RBP18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 KLHL36Q8N4N3 616 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 OR4M2Q8NGB6 313 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 OR2AE1Q8NHA4 323 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 ZNF420Q8TAQ5 688 aaPredicted RBP18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 DNAJC9Q8WXX5 260 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 REPIN1Q9BWE0 567 aaKnown RBP18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 TOR3AQ9H497 397 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 NTN4Q9HB63 628 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 KIF17Q9P2E2 1029 aa18.98■□□□□ 0.63
PTP4A1-203ENST00000473334 CD300LBA8K4G0 201 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 SLC2A1P11166 492 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 ANOS1P23352 680 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 PLBD1Q6P4A8 553 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 SHFQ7M4L6 423 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 MOGAT3Q86VF5 341 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 PHC2Q8IXK0 858 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 TIGD4Q8IY51 512 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 RFLNBQ8N5W9 214 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 TEX29Q8N6K0 151 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 RNF133Q8WVZ7 376 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 UTP4Q969X6 686 aaKnown RBP18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 ABHD6Q9BV23 337 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 TEX12Q9BXU0 123 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 SLC22A4Q9H015 551 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 OPA3Q9H6K4 179 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 PATZ1Q9HBE1 687 aaKnown RBP18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 SLC25A19Q9HC21 320 aa18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 NOP16Q9Y3C1 178 aaKnown RBP18.97■□□□□ 0.63
PTP4A1-203ENST00000473334 C5orf63A6NC05 138 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 GGT3PA6NGU5 568 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 PRODHO43272 600 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 FOXH1O75593 365 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 GATA3P23771 443 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 HSD11B1P28845 292 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 MDH2P40926 338 aaKnown RBP18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 GATA4P43694 442 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 CX3CR1P49238 355 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 RAD23AP54725 363 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 LCN2P80188 198 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 ZNF181Q2M3W8 571 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 DCAF12L2Q5VW00 463 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 MUC20Q8N307 709 aaPredicted RBP18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 CELF2-AS1Q8N7Q2 184 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 ZMYND19Q96E35 227 aaPredicted RBP18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 PLEKHA8Q96JA3 519 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 TMPRSS13Q9BYE2 586 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 MMADHCQ9H3L0 296 aaPredicted RBP18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 METTL17Q9H7H0 456 aaPredicted RBP18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 METRNQ9UJH8 293 aa18.96■□□□□ 0.63
PTP4A1-203ENST00000473334 IGHV3-64DA0A0J9YX35 117 aa18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 LRRC30A6NM36 301 aa18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 J3QLI3 93 aa18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 XRCC2O43543 280 aa18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 CYB5R3P00387 301 aaPredicted RBP18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 CD200P41217 278 aa18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 MAB21L1Q13394 359 aa18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 OR8G1Q15617 311 aa18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 C1orf87Q8N0U7 546 aa18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 OR5K1Q8NHB7 308 aa18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 PAPOLBQ9NRJ5 636 aaKnown RBP18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 N6AMT1Q9Y5N5 214 aa18.95■□□□□ 0.62
PTP4A1-203ENST00000473334 F5H0A9 414 aaPredicted RBP18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 APOC1P02654 83 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 CA6P23280 308 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 SCGB2A2Q13296 93 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 KRTAP24-1Q3LI83 254 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 KLHL12Q53G59 568 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 SLC35D3Q5M8T2 416 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 TMEM236Q5W0B7 351 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 FAHD1Q6P587 224 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 C1orf229Q6ZS94 237 aaPredicted RBP18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 RHOUQ7L0Q8 258 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 CPOQ8IVL8 374 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 ERGIC1Q969X5 290 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 AMELYQ99218 206 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 ADAT1Q9BUB4 502 aaKnown RBP18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 SP140LQ9H930 580 aa18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 MRPL15Q9P015 296 aaKnown RBP18.94■□□□□ 0.62
PTP4A1-203ENST00000473334 WNK2Q9Y3S1 2297 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 ARHGAP32A7KAX9 2087 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 PPIAL4EA0A075B759 164 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 LOC105371242A0A075B767 164 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 PPIAL4CA0A0B4J2A2 164 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 PPIAL4DF5H284 164 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 TBX1O43435 398 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 TCF21O43680 179 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 GMDSO60547 372 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 SELENOFO60613 162 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 AVPP01185 164 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 ANXA2P07355 339 aaKnown RBP18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 PPIAL4FP0DN26 164 aa18.93■□□□□ 0.62
PTP4A1-203ENST00000473334 ZFP36P26651 326 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms