RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 OPA3Q9H6K4 179 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 MED20Q9H944 212 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 IGHV3-64DA0A0J9YX35 117 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 TCRBV3S1A0A5B6 114 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 H0YL77 283 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 TMEM178BH3BS89 294 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 GLCEO94923 617 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 IGHV2-70P01814 119 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 HLA-DPB1P04440 258 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 PRKACGP22612 351 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 MMP16P51512 607 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 BNIP1Q12981 228 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 ESCO2Q56NI9 601 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 PLBD1Q6P4A8 553 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 DPY19L4Q7Z388 723 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 MOGAT3Q86VF5 341 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 LRRC28Q86X40 367 aaPredicted RBP16.4■□□□□ 0.22
COMMD1-208ENST00000472729 ERGIC1Q969X5 290 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 C7orf69Q9H7B7 122 aa16.4■□□□□ 0.22
COMMD1-208ENST00000472729 ANK3Q12955 4377 aaKnown RBP16.4■□□□□ 0.22
COMMD1-208ENST00000472729 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.39■□□□□ 0.21
COMMD1-208ENST00000472729 CD300LBA8K4G0 201 aa16.39■□□□□ 0.21
COMMD1-208ENST00000472729 XRCC2O43543 280 aa16.39■□□□□ 0.21
COMMD1-208ENST00000472729 PRSS12P56730 875 aa16.39■□□□□ 0.21
COMMD1-208ENST00000472729 PCK2Q16822 640 aa16.39■□□□□ 0.21
COMMD1-208ENST00000472729 TIGD6Q17RP2 521 aa16.39■□□□□ 0.21
COMMD1-208ENST00000472729 TMEM179BQ7Z7N9 219 aa16.39■□□□□ 0.21
COMMD1-208ENST00000472729 CELF2-AS1Q8N7Q2 184 aa16.39■□□□□ 0.21
COMMD1-208ENST00000472729 OR10S1Q8NGN2 331 aa16.39■□□□□ 0.21
COMMD1-208ENST00000472729 NRBF2Q96F24 287 aa16.39■□□□□ 0.21
COMMD1-208ENST00000472729 CADM1Q9BY67 442 aaKnown RBP16.39■□□□□ 0.21
COMMD1-208ENST00000472729 PRRG3Q9BZD7 231 aa16.39■□□□□ 0.21
COMMD1-208ENST00000472729 MMADHCQ9H3L0 296 aaPredicted RBP16.39■□□□□ 0.21
COMMD1-208ENST00000472729 PAPOLBQ9NRJ5 636 aaKnown RBP16.39■□□□□ 0.21
COMMD1-208ENST00000472729 DCAF16Q9NXF7 216 aa16.39■□□□□ 0.21
COMMD1-208ENST00000472729 ANKRD30BLA7E2S9 258 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 GMDSO60547 372 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 CYB5R3P00387 301 aaPredicted RBP16.38■□□□□ 0.21
COMMD1-208ENST00000472729 H2BFMP0C1H6 154 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 SLC2A1P11166 492 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 CA6P23280 308 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 CX3CR1P49238 355 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 ZNF92Q03936 586 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 ZMYND11Q15326 602 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 SNAI3Q3KNW1 292 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 GLYATL3Q5SZD4 288 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 C1orf146Q5VVC0 180 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 NLRC3Q7RTR2 1065 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 HS3ST5Q8IZT8 346 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 ZNF454Q8N9F8 522 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 SPERTQ8NA61 448 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 PAPD5Q8NDF8 572 aaKnown RBP16.38■□□□□ 0.21
COMMD1-208ENST00000472729 OR2AE1Q8NHA4 323 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 ZNF420Q8TAQ5 688 aaPredicted RBP16.38■□□□□ 0.21
COMMD1-208ENST00000472729 NANPQ8TBE9 248 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 ZNF418Q8TF45 676 aaPredicted RBP16.38■□□□□ 0.21
COMMD1-208ENST00000472729 THEM6Q8WUY1 208 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 FN3KRPQ9HA64 309 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 PATZ1Q9HBE1 687 aaKnown RBP16.38■□□□□ 0.21
COMMD1-208ENST00000472729 MRPL15Q9P015 296 aaKnown RBP16.38■□□□□ 0.21
COMMD1-208ENST00000472729 OR5V1Q9UGF6 321 aa16.38■□□□□ 0.21
COMMD1-208ENST00000472729 PPIAL4EA0A075B759 164 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 PPIAL4DF5H284 164 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 MLNRO43193 412 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 PRODHO43272 600 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 TIPRLO75663 272 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 CIB2O75838 187 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 PPIAL4FP0DN26 164 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 CFL1P23528 166 aaKnown RBP16.37■□□□□ 0.21
COMMD1-208ENST00000472729 CPT2P23786 658 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 OTX1P32242 354 aaPredicted RBP16.37■□□□□ 0.21
COMMD1-208ENST00000472729 DDOSTP39656 456 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 SNAPC1Q16533 368 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 RHOUQ7L0Q8 258 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 OR52H1Q8NGJ2 320 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 ZMYND19Q96E35 227 aaPredicted RBP16.37■□□□□ 0.21
COMMD1-208ENST00000472729 ADAT1Q9BUB4 502 aaKnown RBP16.37■□□□□ 0.21
COMMD1-208ENST00000472729 ABHD6Q9BV23 337 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 REPIN1Q9BWE0 567 aaKnown RBP16.37■□□□□ 0.21
COMMD1-208ENST00000472729 OR10A2Q9H208 303 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 G6PC2Q9NQR9 355 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 TVP23BQ9NYZ1 205 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 DNAJC27Q9NZQ0 273 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 MIOXQ9UGB7 285 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 PPIAL4AQ9Y536 164 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 ATRQ13535 2644 aa16.37■□□□□ 0.21
COMMD1-208ENST00000472729 LOC105371242A0A075B767 164 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 ZNF205O95201 554 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 LYNP07948 512 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 RPS2P15880 293 aaKnown RBP16.36■□□□□ 0.21
COMMD1-208ENST00000472729 KCNJ8Q15842 424 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 ZNF181Q2M3W8 571 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 GFOD2Q3B7J2 385 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 LINC01590Q5TEZ4 76 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 KLBQ86Z14 1044 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 CPOQ8IVL8 374 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 FTMTQ8N4E7 242 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 OR8S1Q8NH09 359 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 RNF133Q8WVZ7 376 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 MRI1Q9BV20 369 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms