RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 TGS1Q96RS0 853 aaKnown RBP1.87□□□□□ -2.11
MDM2-216ENST00000471946 PLIN2Q99541 437 aa1.87□□□□□ -2.11
MDM2-216ENST00000471946 FAM192AQ9GZU8 254 aa1.87□□□□□ -2.11
MDM2-216ENST00000471946 LHX5Q9H2C1 402 aa1.87□□□□□ -2.11
MDM2-216ENST00000471946 TMEM185BQ9H7F4 350 aa1.87□□□□□ -2.11
MDM2-216ENST00000471946 NEK6Q9HC98 313 aa1.87□□□□□ -2.11
MDM2-216ENST00000471946 DHCR7Q9UBM7 475 aaKnown RBP1.87□□□□□ -2.11
MDM2-216ENST00000471946 COMMD3-BMI1R4GMX3 469 aa1.87□□□□□ -2.11
MDM2-216ENST00000471946 UBN2Q6ZU65 1347 aa1.87□□□□□ -2.11
MDM2-216ENST00000471946 IGHV3OR16-8A0A075B7F1 116 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 TMEM120BA0PK00 339 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 NME4O00746 187 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 ERLIN1O75477 346 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 SERPINB7O75635 380 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 CTRB1P17538 263 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 USF1P22415 310 aaPredicted RBP1.86□□□□□ -2.11
MDM2-216ENST00000471946 CALRP27797 417 aaKnown RBP1.86□□□□□ -2.11
MDM2-216ENST00000471946 CD34P28906 385 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 MRPL19P49406 292 aaKnown RBP1.86□□□□□ -2.11
MDM2-216ENST00000471946 RBX1P62877 108 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 SIGLEC14Q08ET2 396 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 PNOCQ13519 176 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 HSDL1Q3SXM5 330 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 ZNF101Q8IZC7 436 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 SLC35G3Q8N808 338 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 C8orf44Q96CB5 159 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 HAUS1Q96CS2 278 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 WDR34Q96EX3 536 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 PRRC1Q96M27 445 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 CHP1Q99653 195 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 ZYG11BQ9C0D3 744 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 TMEM38AQ9H6F2 299 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 ZNF160Q9HCG1 818 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 ACP6Q9NPH0 428 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 SLC39A1Q9NY26 324 aa1.86□□□□□ -2.11
MDM2-216ENST00000471946 PDP1Q9P0J1 537 aaPredicted RBP1.86□□□□□ -2.11
MDM2-216ENST00000471946 IGKV3D-11A0A0A0MRZ8 115 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 IGHV3-49A0A0A0MS15 119 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 PDZK1P1A8MUH7 402 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 VGLL3A8MV65 326 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 C16orf90A8MZG2 172 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 H7C0C1 242 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 PLIN3O60664 434 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 CLTAP09496 248 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 PSMB5P28074 263 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 CD70P32970 193 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 ATP5OP48047 213 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 RAB7AP51149 207 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 NDUFA8P51970 172 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 IL15RAQ13261 267 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 SLC25A35Q3KQZ1 300 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 SPESP1Q6UW49 350 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 TTC29Q8NA56 475 aaPredicted RBP1.85□□□□□ -2.11
MDM2-216ENST00000471946 OR1J4Q8NGS1 313 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 N4BP2L2Q92802 583 aaPredicted RBP1.85□□□□□ -2.11
MDM2-216ENST00000471946 GHSRQ92847 366 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 ZNF229Q9UJW7 825 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 NID2Q14112 1375 aa1.85□□□□□ -2.11
MDM2-216ENST00000471946 A6NDN8 102 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 TEX46H3BTG2 121 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 HPRT1P00492 218 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 HBE1P02100 147 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 PGA4P0DJD7 388 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 PGA3P0DJD8 388 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 PGA5P0DJD9 388 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 TCP1P17987 556 aaKnown RBP1.84□□□□□ -2.11
MDM2-216ENST00000471946 SERPINB8P50452 374 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 DMC1Q14565 340 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 RCN1Q15293 331 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 TMEM220Q6QAJ8 160 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 FAM43BQ6ZT52 329 aaPredicted RBP1.84□□□□□ -2.11
MDM2-216ENST00000471946 SCD5Q86SK9 330 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 LUZP2Q86TE4 346 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 MDP1Q86V88 176 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 BTN2A3PQ96KV6 586 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 GSDMAQ96QA5 445 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 XPO6Q96QU8 1125 aaKnown RBP1.84□□□□□ -2.11
MDM2-216ENST00000471946 RHOXF2Q9BQY4 288 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 UQCC2Q9BRT2 126 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 FRMD8P1Q9BZ68 369 aaPredicted RBP1.84□□□□□ -2.11
MDM2-216ENST00000471946 UCK2Q9BZX2 261 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 ZSCAN16Q9H4T2 348 aaPredicted RBP1.84□□□□□ -2.11
MDM2-216ENST00000471946 RRAGDQ9NQL2 400 aaPredicted RBP1.84□□□□□ -2.11
MDM2-216ENST00000471946 NMRK1Q9NWW6 199 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 LYARQ9NX58 379 aaKnown RBP1.84□□□□□ -2.11
MDM2-216ENST00000471946 FARSAQ9Y285 508 aaKnown RBP1.84□□□□□ -2.11
MDM2-216ENST00000471946 UBIAD1Q9Y5Z9 338 aa1.84□□□□□ -2.11
MDM2-216ENST00000471946 INSRP06213 1382 aa1.84□□□□□ -2.12
MDM2-216ENST00000471946 IGHV3OR16-9A0A0B4J2B5 98 aa1.83□□□□□ -2.12
MDM2-216ENST00000471946 IGHV1-3A0A0C4DH29 117 aa1.83□□□□□ -2.12
MDM2-216ENST00000471946 CCDC169A6NNP5 214 aa1.83□□□□□ -2.12
MDM2-216ENST00000471946 M0R3G1 203 aa1.83□□□□□ -2.12
MDM2-216ENST00000471946 GABRPO00591 440 aa1.83□□□□□ -2.12
MDM2-216ENST00000471946 CHMP2AO43633 222 aa1.83□□□□□ -2.12
MDM2-216ENST00000471946 CDH16O75309 829 aa1.83□□□□□ -2.12
MDM2-216ENST00000471946 AGTP01019 485 aa1.83□□□□□ -2.12
MDM2-216ENST00000471946 MT-ND4P03905 459 aa1.83□□□□□ -2.12
MDM2-216ENST00000471946 TGFBR1P36897 503 aa1.83□□□□□ -2.12
MDM2-216ENST00000471946 UBE2E1P51965 193 aa1.83□□□□□ -2.12
MDM2-216ENST00000471946 CMC4P56277 68 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms