RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 SPATC1Q76KD6 591 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 WDR86Q86TI4 376 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 C3orf56Q8N813 242 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 OR5L1Q8NGL2 311 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 Q8TCH9 128 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 RAB40AQ8WXH6 277 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 UPRTQ96BW1 309 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 SEH1LQ96EE3 360 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 COG8Q96MW5 612 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 ATF6BQ99941 703 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 SSBP3Q9BWW4 388 aaPredicted RBP8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 MED20Q9H944 212 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 SMURF1Q9HCE7 757 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 IL20Q9NYY1 176 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 DUX4Q9UBX2 424 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 CDH10Q9Y6N8 788 aa8.13□□□□□ -1.11
RPRD1B-204ENST00000471511 M0R135 149 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 TNFRSF11BO00300 401 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 TMPRSS2O15393 492 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 SPRY1O43609 319 aaPredicted RBP8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 PTBP3O95758 552 aaKnown RBP8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 HLA-DQA2P01906 255 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 SFTPBP07988 381 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 T-ENOLP0DO92 83 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 SRP9P49458 86 aaKnown RBP8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 PRKXP51817 358 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 SMIM11AP58511 58 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 GNGT1P63211 74 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 BAMBIQ13145 260 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 CRMP1Q14194 572 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 PCK2Q16822 640 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 DEFB112Q30KQ8 113 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 KLHL12Q53G59 568 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 ESCO2Q56NI9 601 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 ARMCX4Q5H9R4 360 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 SAMD4BQ5PRF9 694 aaKnown RBP8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 RUSC1-AS1Q66K80 236 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 DNM1P34Q6PK57 102 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 C9orf139Q6ZV77 190 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 PRSS45Q7RTY3 260 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 DCXRQ7Z4W1 244 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 TMEM179BQ7Z7N9 219 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 MUC20Q8N307 709 aaPredicted RBP8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 PARP8Q8N3A8 854 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 NEIL1Q96FI4 390 aaPredicted RBP8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 ZNF799Q96GE5 643 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 JMJD8Q96S16 334 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 NIPSNAP1Q9BPW8 284 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 NUDT16L1Q9BRJ7 211 aaKnown RBP8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 ZNF747Q9BV97 191 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 TSSK6Q9BXA6 273 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 NDEL1Q9GZM8 345 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 FGF23Q9GZV9 251 aaPredicted RBP8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 NTN4Q9HB63 628 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 DDX28Q9NUL7 540 aaKnown RBP8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 ARMC1Q9NVT9 282 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 LRCH1Q9Y2L9 728 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 N6AMT1Q9Y5N5 214 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 COMMD3-BMI1R4GMX3 469 aa8.12□□□□□ -1.11
RPRD1B-204ENST00000471511 IGHV3OR15-7A0A075B7D8 119 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 TRAV40A0A0B4J280 105 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 ZNF593O00488 134 aaPredicted RBP8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 IDH3BO43837 385 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 SOX14O95416 240 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 FSTL3O95633 263 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 TFF1P04155 84 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 RNASE1P07998 156 aaKnown RBP8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 MMP9P14780 707 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 SPI1P17947 270 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 AMY2BP19961 511 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 OMGP23515 440 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 PITPNBP48739 271 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 TPTEP56180 551 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 KRTAP10-3P60369 221 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 FGF12P61328 243 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 GNB2P62879 340 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 PRB3Q04118 309 aaPredicted RBP8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 SLC36A3Q495N2 470 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 PGM2L1Q6PCE3 622 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 RASSF6Q6ZTQ3 369 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 PGAP1Q75T13 922 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 CPLX4Q7Z7G2 160 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 LNX2Q8N448 690 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 GCSAMQ8N6F7 178 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 TEX29Q8N6K0 151 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 IQCF1Q8N6M8 205 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 BOLLQ8N9W6 283 aaKnown RBP8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 AQP11Q8NBQ7 271 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 PROKR2Q8NFJ6 384 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 OR56B2PQ8NGI1 322 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 OR2AJ1Q8NGZ0 328 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 SGK3Q96BR1 496 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 CLPTM1LQ96KA5 538 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 TBX15Q96SF7 602 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 MRI1Q9BV20 369 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 TRIM15Q9C019 465 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 PRDM13Q9H4Q3 707 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 TAS2R1Q9NYW7 299 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 MIOXQ9UGB7 285 aa8.11□□□□□ -1.11
RPRD1B-204ENST00000471511 OR5V1Q9UGF6 321 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms