RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 KMT2CQ8NEZ4 4911 aaKnown RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 UNC80Q8N2C7 3258 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 ABCA13Q86UQ4 5058 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 RYR2Q92736 4967 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 LRBAP50851 2863 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 IGHV1-69DA0A0B4J2H0 117 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 CLRN2A0PK11 232 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 ARHGEF35A5YM69 484 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 SDHAF1A6NFY7 115 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 OR52A4PA6NMU1 304 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 E7EQL1 145 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 H0YCG3 227 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 CLDN34H7C241 214 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 K7EMT4 169 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 PLPP1O14494 284 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 CHMP2AO43633 222 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 OR7C2O60412 319 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 CDC40O60508 579 aaKnown RBP eCLIP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 FKBP6O75344 327 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 MTX2O75431 263 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 SCELO95171 688 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 IGLV2-8P01709 118 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 PRB1P04280 392 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 SERPINA5P05154 406 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 ZNF43P17038 809 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 ATF6P18850 670 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 HNRNPH3P31942 346 aaKnown RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 FUSP35637 526 aaKnown RBP eCLIP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 TALDO1P37837 337 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 RBM34P42696 430 aaKnown RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 NSG1P42857 185 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 CEBPDP49716 269 aaPredicted RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 TPMTP51580 245 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 UBE2E1P51965 193 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 CMC4P56277 68 aaPredicted RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 PLP1P60201 277 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 RPS23P62266 143 aaKnown RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 ELF3P78545 371 aaPredicted RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 PYDC2Q56P42 97 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 CTSL3PQ5NE16 218 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 TMEM69Q5SWH9 247 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 UBE2UQ5VVX9 321 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 ZFAND6Q6FIF0 208 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 MORN3Q6PF18 240 aaPredicted RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 MBOAT1Q6ZNC8 495 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 TMEM150AQ86TG1 271 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 CDR2LQ86X02 465 aaPredicted RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 ERO1BQ86YB8 467 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 GPR26Q8NDV2 337 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 B3GNT7Q8NFL0 401 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 OR52M1Q8NGK5 317 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 OR10G6Q8NH81 332 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 GPR151Q8TDV0 419 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 GPR82Q96P67 336 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 SLC39A3Q9BRY0 314 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 TRIM45Q9H8W5 580 aaPredicted RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 TMEM27Q9HBJ8 222 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 TMEM9BQ9NQ34 198 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 NLE1Q9NVX2 485 aaPredicted RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 YARS2Q9Y2Z4 477 aaKnown RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 CELSR1Q9NYQ6 3014 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 MGAM2Q2M2H8 2515 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 TLN2Q9Y4G6 2542 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 SETBP1Q9Y6X0 1596 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 NIPBLQ6KC79 2804 aaeCLIP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 MXRA5Q9NR99 2828 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 ZANQ9Y493 2812 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 NUP205Q92621 2012 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 RIF1Q5UIP0 2472 aaKnown RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 DSTQ03001 7570 aaKnown RBP0.43□□□□□ -2.34
UBXN4-207ENST00000471246 NBEAQ8NFP9 2946 aa0.43□□□□□ -2.34
UBXN4-207ENST00000471246 FAM186AA6NE01 2351 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 RIMBP3CA6NJZ7 1639 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 RIMBP3BA6NNM3 1639 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 RIMBP3Q9UFD9 1639 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 CEP164Q9UPV0 1460 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 ZBED9Q6R2W3 1325 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 SPTBN5Q9NRC6 3674 aaKnown RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 PTPRZ1P23471 2315 aaPredicted RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 MED13Q9UHV7 2174 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 PRRC2CQ9Y520 2896 aaKnown RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 NACADO15069 1562 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 KDM5CP41229 1560 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 SONP18583 2426 aaKnown RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 IGLV10-54A0A075B6I4 117 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 SMIM26A0A096LP01 95 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 A0A0J9YXV3 536 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 NCBP2LA6PVI3 153 aaKnown RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 LYRM9A8MSI8 78 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 PDZK1P1A8MUH7 402 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 RAD51CO43502 376 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 KLHL41O60662 606 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 SHOX2O60902 331 aaPredicted RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 SERPINB7O75635 380 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 GATBO75879 557 aaKnown RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 FSTL3O95633 263 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 TSPAN13O95857 204 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 IL1BP01584 269 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 IGKV1-16P04430 117 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms