RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 DHRS12A0PJE2 317 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 ISPDA4D126 451 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 A6NHS1 94 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 RIIAD1A6NNX1 92 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 SRRM5B3KS81 715 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 H3BN98 237 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 IFNGP01579 166 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 MMP7P09237 267 aaPredicted RBP4.89□□□□□ -1.63
VARS-222ENST00000470953 TSPAN19P0C672 248 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 MED14OSP0DP75 135 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 ZNF823P16415 610 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 ZNF3P17036 446 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 FUT4P22083 530 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 S100A1P23297 94 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 TNFSF4P23510 183 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 MTNR1AP48039 350 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 EVX1P49640 407 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 ZNF81P51508 661 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 ZNF133P52736 654 aaPredicted RBP4.89□□□□□ -1.63
VARS-222ENST00000470953 UCP2P55851 309 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 PPP1CBP62140 327 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 PSG4Q00888 419 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 TEKQ02763 1124 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 TSPAN31Q12999 210 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 CBX3Q13185 183 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 TRIM25Q14258 630 aaKnown RBP4.89□□□□□ -1.63
VARS-222ENST00000470953 SNCBQ16143 134 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 PCGF3Q3KNV8 242 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 SLC36A3Q495N2 470 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 SLC35F1Q5T1Q4 408 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 FAM27BQ5VT28 67 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 OR2T5Q6IEZ7 315 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 LCN8Q6JVE9 175 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 PGBD2Q6P3X8 592 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 NHLRC1Q6VVB1 395 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 ZNF620Q6ZNG0 422 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 C9orf139Q6ZV77 190 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 RFPL4BQ6ZWI9 263 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 FAM122BQ7Z309 247 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 ZER1Q7Z7L7 766 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 C1orf174Q8IYL3 243 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 PAQR4Q8N4S7 273 aaPredicted RBP4.89□□□□□ -1.63
VARS-222ENST00000470953 C11orf44Q8N8P7 122 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 LRRC75AQ8NAA5 344 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 AQP11Q8NBQ7 271 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 SDR9C7Q8NEX9 313 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 OR9Q2Q8NGE9 314 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 OR2AJ1Q8NGZ0 328 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 OR2T29Q8NH02 315 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 OR4K13Q8NH42 304 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 IPCEF1Q8WWN9 437 aaPredicted RBP4.89□□□□□ -1.63
VARS-222ENST00000470953 NABP1Q96AH0 204 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 OTULINQ96BN8 352 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 RAB39BQ96DA2 213 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 ASB9Q96DX5 294 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 TIMD4Q96H15 378 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 C7orf34Q96L11 122 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 SAMD8Q96LT4 415 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 COG8Q96MW5 612 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 NMNAT3Q96T66 252 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 ASCL2Q99929 193 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 TEX12Q9BXU0 123 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 EGLN1Q9GZT9 426 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 FN3KQ9H479 309 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 ZNF556Q9HAH1 456 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 RPRD1BQ9NQG5 326 aaKnown RBP4.89□□□□□ -1.63
VARS-222ENST00000470953 CYSLTR2Q9NS75 346 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 CGGBP1Q9UFW8 167 aaPredicted RBP4.89□□□□□ -1.63
VARS-222ENST00000470953 CD300AQ9UGN4 299 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 COA3Q9Y2R0 106 aaPredicted RBP4.89□□□□□ -1.63
VARS-222ENST00000470953 CDH10Q9Y6N8 788 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 DNAH11Q96DT5 4516 aa4.89□□□□□ -1.63
VARS-222ENST00000470953 OR6C6A6NF89 314 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 C17orf100A8MU93 164 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 CLDN25C9JDP6 229 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 H3BSA7 217 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 IMPA2O14732 288 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 GPR37O15354 613 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 SPRY3O43610 288 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 IDH3BO43837 385 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 UBOX5O94941 541 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 SOX14O95416 240 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 CLPTM1O96005 669 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 PLATP00750 562 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 CST1P01037 141 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 SEMG1P04279 462 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 RAP2AP10114 183 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 IGLL1P15814 213 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 HIST1H1CP16403 213 aaKnown RBP4.88□□□□□ -1.63
VARS-222ENST00000470953 ZNF12P17014 697 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 HOXB6P17509 224 aaKnown RBP4.88□□□□□ -1.63
VARS-222ENST00000470953 PAICSP22234 425 aaKnown RBP4.88□□□□□ -1.63
VARS-222ENST00000470953 POU1F1P28069 291 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 SLC6A9P48067 706 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 RGS6P49758 472 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 RASSF2P50749 326 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 SEC61A1P61619 476 aaKnown RBP4.88□□□□□ -1.63
VARS-222ENST00000470953 CCL8P80075 99 aa4.88□□□□□ -1.63
VARS-222ENST00000470953 MRPS11P82912 194 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms