RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 KIF2BQ8N4N8 673 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 SAMD12Q8N8I0 201 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF615Q8N8J6 731 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 EIF1ADQ8N9N8 165 aaKnown RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 MNS1Q8NEH6 495 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 SPATA4Q8NEY3 305 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 STEAP2Q8NFT2 490 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 OR1K1Q8NGR3 316 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 OR52J3Q8NH60 311 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ACMSDQ8TDX5 336 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ANKRD49Q8WVL7 239 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 MS4A14Q96JA4 679 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 PKNOX2Q96KN3 472 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 JSRP1Q96MG2 331 aaPredicted RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 RILPQ96NA2 401 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 COL21A1Q96P44 957 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF300Q96RE9 604 aaPredicted RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 TNFRSF13CQ96RJ3 184 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF607Q96SK3 696 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ATOH8Q96SQ7 321 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ZBTB18Q99592 522 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 MAPKAP1Q9BPZ7 522 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 MRPL57Q9BQC6 102 aaKnown RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ALG12Q9BV10 488 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 MRPL13Q9BYD1 178 aaKnown RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 HES7Q9BYE0 225 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 UCK2Q9BZX2 261 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 FNDC4Q9H6D8 234 aaPredicted RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 METTL7AQ9H8H3 244 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 PLEKHF2Q9H8W4 249 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 LRTM1Q9HBL6 345 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 FAIMQ9NVQ4 179 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF639Q9UID6 485 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF223Q9UK11 482 aaPredicted RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 IKZF3Q9UKT9 509 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 MCTS1Q9ULC4 181 aaKnown RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 C15orf41Q9Y2V0 281 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 WDR45Q9Y484 360 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ASB4Q9Y574 426 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 POLQO75417 2590 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 SPG11Q96JI7 2443 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 PRRC2AP48634 2157 aaKnown RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 NAV3Q8IVL0 2385 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 TEX15Q9BXT5 2789 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 ARID1AO14497 2285 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 FREM3P0C091 2139 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 EML6Q6ZMW3 1958 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 IGKV3D-15A0A087WSY6 115 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 UQCRHLA0A096LP55 91 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 IGLV3-32A0A0A0MS00 114 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 PPIAL4CA0A0B4J2A2 164 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 SH3PXD2BA1X283 911 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 NCF1BA6NI72 391 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-206ENST00000470687 SLC22A20A6NK97 555 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 FAM166BA8MTA8 275 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 NCF1CA8MVU1 366 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-206ENST00000470687 SUPT3HB4E1H0 165 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 C11orf98E9PRG8 122 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 H3BNH8 94 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 PLPP1O14494 284 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 DNAJB6O75190 326 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 SUPT3HO75486 399 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 REM1O75628 298 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 ECDO95905 644 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-206ENST00000470687 IGLV1-44P01699 117 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 KLK1P06870 262 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 KRT16P08779 473 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 SNRPAP09012 282 aaKnown RBP2.11□□□□□ -2.07
UBXN4-206ENST00000470687 SNRPCP09234 159 aaKnown RBP2.11□□□□□ -2.07
UBXN4-206ENST00000470687 CSF3P09919 207 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 PPIAL4GP0DN37 164 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 CLUP10909 449 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 DBTP11182 482 aaKnown RBP2.11□□□□□ -2.07
UBXN4-206ENST00000470687 HPGDP15428 266 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF708P17019 499 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF17P17021 662 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 PSMB1P20618 241 aaKnown RBP2.11□□□□□ -2.07
UBXN4-206ENST00000470687 CALB2P22676 271 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 CRYGSP22914 178 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 ME2P23368 584 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 IL12BP29460 328 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 UGT2B10P36537 528 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 MAGEA8P43361 318 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 HTR5AP47898 357 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 DNASE1L1P49184 302 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 CEBPDP49716 269 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-206ENST00000470687 SERPINB8P50452 374 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF136P52737 540 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 PLTPP55058 493 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 RAG2P55895 527 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 GNG11P61952 73 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 SRPXP78539 464 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 PLCXD2Q0VAA5 305 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 OR4D1Q15615 310 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 NRF1Q16656 503 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 CNPY1Q3B7I2 92 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 ANKRD55Q3KP44 614 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 CCDC153Q494R4 210 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 CYBRD1Q53TN4 286 aa2.11□□□□□ -2.07
UBXN4-206ENST00000470687 BEX5Q5H9J7 111 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms