RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 CD300AQ9UGN4 299 aa14.58□□□□□ -0.08
COL7A1-208ENST00000470076 CDH10Q9Y6N8 788 aa14.58□□□□□ -0.08
COL7A1-208ENST00000470076 CD300LBA8K4G0 201 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 WIPF1O43516 503 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 SNX3O60493 162 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 GMDSO60547 372 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 KRT36O76013 467 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 PTBP3O95758 552 aaKnown RBP14.57□□□□□ -0.08
COL7A1-208ENST00000470076 CA6P23280 308 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 OTX1P32242 354 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-208ENST00000470076 MSX2P35548 267 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-208ENST00000470076 NPY4RP50391 375 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 BPIFB3P59826 476 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 MPPED2Q15777 294 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 PRAMEF6Q5VXH4 476 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 ZNF841Q6ZN19 808 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 ZDHHC21Q8IVQ6 265 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 LINC00471Q8N535 108 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 PLPP7Q8NBV4 271 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 PROKR2Q8NFJ6 384 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 OR10S1Q8NGN2 331 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 OR2T4Q8NH00 348 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 CDRT15Q96T59 188 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 FAM107BQ9H098 131 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 EGLN3Q9H6Z9 239 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 UNKLQ9H9P5 680 aaKnown RBP14.57□□□□□ -0.08
COL7A1-208ENST00000470076 RNF7Q9UBF6 113 aa14.57□□□□□ -0.08
COL7A1-208ENST00000470076 BHLHE40O14503 412 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 ENSAO43768 121 aaKnown RBP14.56□□□□□ -0.08
COL7A1-208ENST00000470076 PYCR1P32322 319 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 HMGA2P52926 109 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 ZNF92Q03936 586 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 SPATS1Q496A3 300 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 CD276Q5ZPR3 534 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 C16orf87Q6PH81 154 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 DRAM2Q6UX65 266 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 CYB561A3Q8NBI2 242 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 OR4C15Q8NGM1 316 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 DDOQ99489 341 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 ADAT1Q9BUB4 502 aaKnown RBP14.56□□□□□ -0.08
COL7A1-208ENST00000470076 PRDM13Q9H4Q3 707 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 TRIM36Q9NQ86 728 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 IL20Q9NYY1 176 aa14.56□□□□□ -0.08
COL7A1-208ENST00000470076 SOX21Q9Y651 276 aaPredicted RBP14.56□□□□□ -0.08
COL7A1-208ENST00000470076 GGT3PA6NGU5 568 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 LGALS8O00214 317 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 FGF12P61328 243 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 SNAI3Q3KNW1 292 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 GPR157Q5UAW9 335 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 CPLX4Q7Z7G2 160 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 SPERTQ8NA61 448 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 C19orf18Q8NEA5 215 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 MMADHCQ9H3L0 296 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-208ENST00000470076 OPA3Q9H6K4 179 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 NDE1Q9NXR1 346 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 MRPL15Q9P015 296 aaKnown RBP14.55□□□□□ -0.08
COL7A1-208ENST00000470076 ERVK-18Q9QC07 812 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 LYVE1Q9Y5Y7 322 aa14.55□□□□□ -0.08
COL7A1-208ENST00000470076 TVP23AA6NH52 213 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 C22orf46C9J442 243 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 NDUFA2O43678 99 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 LIPFP07098 398 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 RPS27P42677 84 aaKnown RBP14.54□□□□□ -0.08
COL7A1-208ENST00000470076 DEFB112Q30KQ8 113 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 ZNF362Q5T0B9 420 aaPredicted RBP14.54□□□□□ -0.08
COL7A1-208ENST00000470076 C16orf89Q6UX73 402 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 BRD3OSQ6XYD6 125 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 RASSF6Q6ZTQ3 369 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 DCXRQ7Z4W1 244 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 OR2AE1Q8NHA4 323 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 ZDHHC16Q969W1 377 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 TECTBQ96PL2 329 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 BTBD10Q9BSF8 475 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 COPS4Q9BT78 406 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 TRIM15Q9C019 465 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 SLITRK2Q9H156 845 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 KIF17Q9P2E2 1029 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 TAGLN3Q9UI15 199 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 COMMD3-BMI1R4GMX3 469 aa14.54□□□□□ -0.08
COL7A1-208ENST00000470076 TRAV38-1A0A0B4J264 116 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-208ENST00000470076 MDFIC2A0A1B0GVS7 189 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 TNFRSF11BO00300 401 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 HOXA3O43365 443 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-208ENST00000470076 FMO3P31513 532 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 MZT1Q08AG7 82 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 OR8B8Q15620 311 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 PCK2Q16822 640 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 GLYATL3Q5SZD4 288 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 SFRP4Q6FHJ7 346 aaPredicted RBP14.53□□□□□ -0.08
COL7A1-208ENST00000470076 SPATC1Q76KD6 591 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 LNX2Q8N448 690 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 SLC37A3Q8NCC5 494 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 OR9Q2Q8NGE9 314 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 OR51L1Q8NGJ5 315 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 ZNRF4Q8WWF5 429 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 TMIGD2Q96BF3 282 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 KCNJ15Q99712 375 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 PCGF1Q9BSM1 259 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 NOX4Q9NPH5 578 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms