RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 IGLV3-9A0A075B6K5 115 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 J3QW42 95 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 LALBAP00709 142 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 SERPINF1P36955 418 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 KIR3DL2P43630 455 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 MMP16P51512 607 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 NANOS3P60323 173 aaKnown RBP12.67□□□□□ -0.38
COL9A3-209ENST00000469852 RPS23P62266 143 aaKnown RBP12.67□□□□□ -0.38
COL9A3-209ENST00000469852 ACTA2P62736 377 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 ACTG2P63267 376 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 ZNF92Q03936 586 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 GK2Q14410 553 aaPredicted RBP12.67□□□□□ -0.38
COL9A3-209ENST00000469852 GFOD2Q3B7J2 385 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 MBNL2Q5VZF2 373 aaKnown RBP12.67□□□□□ -0.38
COL9A3-209ENST00000469852 XAF1Q6GPH4 301 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 C11orf71Q6IPW1 123 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 CATSPERDQ86XM0 798 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 SYS1Q8N2H4 156 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 MUC15Q8N387 334 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 PRSS35Q8N3Z0 413 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 ZNF485Q8NCK3 441 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 SPRYD4Q8WW59 207 aaPredicted RBP12.67□□□□□ -0.38
COL9A3-209ENST00000469852 GTF3AQ92664 365 aaKnown RBP12.67□□□□□ -0.38
COL9A3-209ENST00000469852 SGK3Q96BR1 496 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 CMBLQ96DG6 245 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 PGAM5Q96HS1 289 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 LYZL4Q96KX0 146 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 TRAF4Q9BUZ4 470 aaPredicted RBP12.67□□□□□ -0.38
COL9A3-209ENST00000469852 PBOV1Q9GZY1 135 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 DUSP13Q9UII6 198 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 GTF2A1LQ9UNN4 478 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 LAMP3Q9UQV4 416 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 SLC22A13Q9Y226 551 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 TPRKBQ9Y3C4 175 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 ARFGEF3Q5TH69 2177 aa12.67□□□□□ -0.38
COL9A3-209ENST00000469852 LOC110117498-PIK3R3F6TDL0 507 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 APOC1P02654 83 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 TTRP02766 147 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 MYL12AP19105 171 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 GTF2A1P52655 376 aaPredicted RBP12.66□□□□□ -0.38
COL9A3-209ENST00000469852 PSG7Q13046 419 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 IRF3Q14653 427 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 SWI5Q1ZZU3 235 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 ZNF829Q3KNS6 432 aaPredicted RBP12.66□□□□□ -0.38
COL9A3-209ENST00000469852 ZNF718Q3SXZ3 478 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 WDR38Q5JTN6 314 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 FBXW12Q6X9E4 464 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 FAM220AQ7Z4H9 259 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 DTX2Q86UW9 622 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 FBXL14Q8N1E6 418 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 KLHL36Q8N4N3 616 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 SYNPRQ8TBG9 265 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 MYDGFQ969H8 173 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 PLK3Q9H4B4 646 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 NUFIP1Q9UHK0 495 aaKnown RBP12.66□□□□□ -0.38
COL9A3-209ENST00000469852 OR52A1Q9UKL2 312 aa12.66□□□□□ -0.38
COL9A3-209ENST00000469852 CAB39Q9Y376 341 aaPredicted RBP12.66□□□□□ -0.38
COL9A3-209ENST00000469852 RGS10O43665 173 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 LILRA1O75019 489 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 ATE1O95260 518 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 CD53P19397 219 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 GCH1P30793 250 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 ALDH3B1P43353 468 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 MAP2K4P45985 399 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 CDH15P55291 814 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 KLF3P57682 345 aaPredicted RBP12.65□□□□□ -0.38
COL9A3-209ENST00000469852 TNK1Q13470 666 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 EFNB3Q15768 340 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 ODF4Q2M2E3 257 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 BCL2L15Q5TBC7 163 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 OR2T2Q6IF00 324 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 PAMR1Q6UXH9 720 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 KCTD20Q7Z5Y7 419 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 KLBQ86Z14 1044 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 NANOGP1Q8N7R0 232 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 OR52H1Q8NGJ2 320 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 OR5L1Q8NGL2 311 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 OR2G2Q8NGZ5 317 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 GATAD2BQ8WXI9 593 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 SPSB4Q96A44 273 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 HAVCR1Q96D42 359 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 REEP6Q96HR9 211 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 LURAP1Q96LR2 239 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 CDCA4Q9BXL8 241 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 OR10A2Q9H208 303 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 CBLN4Q9NTU7 201 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 FRRS1LQ9P0K9 344 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 PLEKHA6Q9Y2H5 1048 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 SNX5Q9Y5X3 404 aa12.65□□□□□ -0.38
COL9A3-209ENST00000469852 SIRT4Q9Y6E7 314 aaPredicted RBP12.65□□□□□ -0.38
COL9A3-209ENST00000469852 hCG_38984A0A1B0GV85 526 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 H3BSH0 61 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 XRCC2O43543 280 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 IGLV3-1P01715 115 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 IGHV3-13P01766 116 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 MT-ND5P03915 603 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 TACSTD2P09758 323 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 RAC2P15153 192 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 CDKN1AP38936 164 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 FAM3AP98173 230 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms