RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 DPY19L4Q7Z388 723 aa15.38■□□□□ 0.05
PHGDH-204ENST00000469443 ERI1Q8IV48 349 aaKnown RBP15.38■□□□□ 0.05
PHGDH-204ENST00000469443 TEX29Q8N6K0 151 aa15.38■□□□□ 0.05
PHGDH-204ENST00000469443 OR6N2Q8NGY6 317 aa15.38■□□□□ 0.05
PHGDH-204ENST00000469443 OR2AE1Q8NHA4 323 aa15.38■□□□□ 0.05
PHGDH-204ENST00000469443 ZNF420Q8TAQ5 688 aaPredicted RBP15.38■□□□□ 0.05
PHGDH-204ENST00000469443 SPRYD4Q8WW59 207 aaPredicted RBP15.38■□□□□ 0.05
PHGDH-204ENST00000469443 REPIN1Q9BWE0 567 aaKnown RBP15.38■□□□□ 0.05
PHGDH-204ENST00000469443 METTL17Q9H7H0 456 aaPredicted RBP15.38■□□□□ 0.05
PHGDH-204ENST00000469443 MARCH7Q9H992 704 aa15.38■□□□□ 0.05
PHGDH-204ENST00000469443 PATZ1Q9HBE1 687 aaKnown RBP15.38■□□□□ 0.05
PHGDH-204ENST00000469443 STAB1Q9NY15 2570 aa15.38■□□□□ 0.05
PHGDH-204ENST00000469443 CD300LBA8K4G0 201 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 PRR23D1E9PI22 279 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-204ENST00000469443 J3QLI3 93 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 FOXH1O75593 365 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 HMGN1P05114 100 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 PRR23D2P0DMB1 279 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-204ENST00000469443 ANOS1P23352 680 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 GATA3P23771 443 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 GSTT1P30711 240 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 MDH2P40926 338 aaKnown RBP15.37■□□□□ 0.05
PHGDH-204ENST00000469443 SLC15A1P46059 708 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 RASSF2P50749 326 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 GRB2P62993 217 aaKnown RBP15.37■□□□□ 0.05
PHGDH-204ENST00000469443 LCN2P80188 198 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 CDK5Q00535 292 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 ZNF92Q03936 586 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 ZNF181Q2M3W8 571 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 GLYATL3Q5SZD4 288 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 LIPNQ5VXI9 398 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 SPATC1Q76KD6 591 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 SHFQ7M4L6 423 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 MOGAT3Q86VF5 341 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 MUC20Q8N307 709 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-204ENST00000469443 CELF2-AS1Q8N7Q2 184 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 NRBF2Q96F24 287 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 TMPRSS13Q9BYE2 586 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 SLC22A4Q9H015 551 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 OR51V1Q9H2C8 321 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 TOR3AQ9H497 397 aa15.37■□□□□ 0.05
PHGDH-204ENST00000469443 NOP16Q9Y3C1 178 aaKnown RBP15.37■□□□□ 0.05
PHGDH-204ENST00000469443 IGHV3-64DA0A0J9YX35 117 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 C5orf63A6NC05 138 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 GGT3PA6NGU5 568 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 TCF21O43680 179 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 AVPP01185 164 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 SLC2A1P11166 492 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 CD200P41217 278 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 GATA4P43694 442 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 SRSF2Q01130 221 aaKnown RBP15.36■□□□□ 0.05
PHGDH-204ENST00000469443 SCGB2A2Q13296 93 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 PLBD1Q6P4A8 553 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 C1orf229Q6ZS94 237 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-204ENST00000469443 TIGD4Q8IY51 512 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 C1orf87Q8N0U7 546 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 RNF133Q8WVZ7 376 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 DNAJC9Q8WXX5 260 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 ABHD6Q9BV23 337 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 OPA3Q9H6K4 179 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 NTN4Q9HB63 628 aa15.36■□□□□ 0.05
PHGDH-204ENST00000469443 PPIAL4EA0A075B759 164 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 LOC105371242A0A075B767 164 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 PPIAL4CA0A0B4J2A2 164 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 LRRC30A6NM36 301 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 F5H0A9 414 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-204ENST00000469443 PPIAL4DF5H284 164 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 PRODHO43272 600 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 XRCC2O43543 280 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 TIPRLO75663 272 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 ATP5HO75947 161 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 CYB5R3P00387 301 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-204ENST00000469443 PPIAL4FP0DN26 164 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 CA6P23280 308 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 ZFP36P26651 326 aaKnown RBP15.35■□□□□ 0.05
PHGDH-204ENST00000469443 HSD11B1P28845 292 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 CX3CR1P49238 355 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 RAD23AP54725 363 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 MAB21L1Q13394 359 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 OR8G1Q15617 311 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 RHOUQ7L0Q8 258 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 ERGIC1Q969X5 290 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 UTP4Q969X6 686 aaKnown RBP15.35■□□□□ 0.05
PHGDH-204ENST00000469443 ZMYND19Q96E35 227 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-204ENST00000469443 PLEKHA8Q96JA3 519 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 TEX12Q9BXU0 123 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 SLC25A19Q9HC21 320 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 KIF17Q9P2E2 1029 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 N6AMT1Q9Y5N5 214 aa15.35■□□□□ 0.05
PHGDH-204ENST00000469443 CEACAM18A8MTB9 384 aa15.34■□□□□ 0.05
PHGDH-204ENST00000469443 GMDSO60547 372 aa15.34■□□□□ 0.05
PHGDH-204ENST00000469443 APOC1P02654 83 aa15.34■□□□□ 0.05
PHGDH-204ENST00000469443 PMELP40967 661 aa15.34■□□□□ 0.05
PHGDH-204ENST00000469443 C1QL2Q7Z5L3 287 aa15.34■□□□□ 0.05
PHGDH-204ENST00000469443 CPOQ8IVL8 374 aa15.34■□□□□ 0.05
PHGDH-204ENST00000469443 SPSB4Q96A44 273 aa15.34■□□□□ 0.05
PHGDH-204ENST00000469443 AMELYQ99218 206 aa15.34■□□□□ 0.05
PHGDH-204ENST00000469443 ADAT1Q9BUB4 502 aaKnown RBP15.34■□□□□ 0.05
PHGDH-204ENST00000469443 OCEL1Q9H607 264 aa15.34■□□□□ 0.05
PHGDH-204ENST00000469443 C7orf69Q9H7B7 122 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms