RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 RSPO1Q2MKA7 263 aaPredicted RBP6.7□□□□□ -1.34
COL6A3-208ENST00000468792 ZFP69Q49AA0 526 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 WIPI1Q5MNZ9 446 aaPredicted RBP6.7□□□□□ -1.34
COL6A3-208ENST00000468792 PHYHD1Q5SRE7 291 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 OTPQ5XKR4 325 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 CARD17Q5XLA6 110 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 SPINK14Q6IE38 97 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 SLC25A25Q6KCM7 469 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 AAED1Q7RTV5 226 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 LUZP2Q86TE4 346 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 SULF2Q8IWU5 870 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 UBE2J2Q8N2K1 259 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 OR1J2Q8NGS2 313 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 OR14K1Q8NGZ2 314 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 OR51E1Q8TCB6 317 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 ADAT3Q96EY9 351 aaPredicted RBP6.7□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF486Q96H40 463 aaPredicted RBP6.7□□□□□ -1.34
COL6A3-208ENST00000468792 SIGLEC12Q96PQ1 595 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 RGCCQ9H4X1 137 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 AUNIPQ9H7T9 357 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 BCO1Q9HAY6 547 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 NEK6Q9HC98 313 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 GPR84Q9NQS5 396 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 NUDT15Q9NV35 164 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 TMEM38BQ9NVV0 291 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 MCUBQ9NWR8 336 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 IL17BQ9UHF5 180 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 CLEC4AQ9UMR7 237 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 V9GYS6 101 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 NCOA6Q14686 2063 aaPredicted RBP6.7□□□□□ -1.34
COL6A3-208ENST00000468792 A0A0A6YYJ9 748 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 A0A1B0GUH1 482 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 DCDC2BA2VCK2 349 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 OR6C6A6NF89 314 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 SNRPGP15A8MWD9 76 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 TMEM14DPA8MWL7 114 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 MASP2O00187 686 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 SYNGR3O43761 229 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 CXCL13O43927 109 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 ICMTO60725 284 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 DHRS3O75911 302 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 NDUFB6O95139 128 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 C1QBP02746 253 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 COX5BP10606 129 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 CPN1P15169 458 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF20P17024 532 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 ITGA3P26006 1051 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF93P35789 620 aaPredicted RBP6.69□□□□□ -1.34
COL6A3-208ENST00000468792 GNALP38405 381 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 EIF1AXP47813 144 aaKnown RBP6.69□□□□□ -1.34
COL6A3-208ENST00000468792 GZMKP49863 264 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 EFNB2P52799 333 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 GALK2Q01415 458 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 SPOCK1Q08629 439 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 MAB21L1Q13394 359 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 MADCAM1Q13477 382 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 RNPS1Q15287 305 aaKnown RBP6.69□□□□□ -1.34
COL6A3-208ENST00000468792 ZMYND11Q15326 602 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 CARTPTQ16568 116 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 CCDC157Q569K6 752 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 METTL11BQ5VVY1 283 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 IGFL2Q6UWQ7 119 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 ABHD12BQ7Z5M8 362 aaPredicted RBP6.69□□□□□ -1.34
COL6A3-208ENST00000468792 DPPA2Q7Z7J5 298 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 NOXA1Q86UR1 476 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF100Q8IYN0 542 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 GALNT16Q8N428 558 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 FAM109AQ8N4B1 249 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 MEIOBQ8N635 442 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 IL22RA1Q8N6P7 574 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF283Q8N7M2 679 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 TMEM229BQ8NBD8 167 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 OR51A2Q8NGJ7 313 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 UBASH3BQ8TF42 649 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 AQP3Q92482 292 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 RELTQ969Z4 430 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 RNF170Q96K19 258 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 RBM24Q9BX46 236 aaKnown RBP6.69□□□□□ -1.34
COL6A3-208ENST00000468792 TTTY12Q9BZ98 90 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 ALX4Q9H161 411 aaPredicted RBP6.69□□□□□ -1.34
COL6A3-208ENST00000468792 IRF2BPLQ9H1B7 796 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 OR10A2Q9H208 303 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 CNTD2Q9H8S5 307 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 MYOZ1Q9NP98 299 aaPredicted RBP6.69□□□□□ -1.34
COL6A3-208ENST00000468792 PARD6AQ9NPB6 346 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 KLK11Q9UBX7 282 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 TIMM10BQ9Y5J6 103 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 NPTNQ9Y639 398 aa6.69□□□□□ -1.34
COL6A3-208ENST00000468792 PHF3Q92576 2039 aaKnown RBP6.68□□□□□ -1.34
COL6A3-208ENST00000468792 TRAV18A0A075B6X5 111 aa6.68□□□□□ -1.34
COL6A3-208ENST00000468792 IGHV3-15A0A0B4J1V0 119 aa6.68□□□□□ -1.34
COL6A3-208ENST00000468792 FAM172BPA6NC97 362 aa6.68□□□□□ -1.34
COL6A3-208ENST00000468792 M0R135 149 aa6.68□□□□□ -1.34
COL6A3-208ENST00000468792 RAB27BO00194 218 aa6.68□□□□□ -1.34
COL6A3-208ENST00000468792 SGCEO43556 437 aa6.68□□□□□ -1.34
COL6A3-208ENST00000468792 GMDSO60547 372 aa6.68□□□□□ -1.34
COL6A3-208ENST00000468792 CD74P04233 296 aa6.68□□□□□ -1.34
COL6A3-208ENST00000468792 FTH1P19P0C7X4 201 aa6.68□□□□□ -1.34
COL6A3-208ENST00000468792 AKAIN1P0CW23 69 aa6.68□□□□□ -1.34
COL6A3-208ENST00000468792 TMIGD3P0DMS9 266 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms