RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 FARS2O95363 451 aaKnown RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 CLPTM1O96005 669 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 CSTBP04080 98 aaKnown RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 LCKP06239 509 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 H2BFMP0C1H6 154 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 OR2T7P0C7T2 308 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 OR8G3PP0DMU2 310 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 NPR2P20594 1047 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 MSR1P21757 451 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 CCNOP22674 350 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 IGHV1-2P23083 117 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 DCKP27707 260 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 PSMB9P28065 219 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 CEACAM8P31997 349 aaPredicted RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 OPRM1P35372 400 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 TIMP3P35625 211 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 CD79BP40259 229 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 CA7P43166 264 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC15A1P46059 708 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 UQCRFS1P47985 274 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ENTPD1P49961 510 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 PRKXP51817 358 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 BLVRAP53004 296 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 OR12D2P58182 307 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 GABARAPL2P60520 117 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 UBE2NP61088 152 aaKnown RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC35A2P78381 396 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 HOXA4Q00056 320 aaPredicted RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 GALK2Q01415 458 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF85Q03923 595 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 EMX1Q04741 257 aaPredicted RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 TMED1Q13445 227 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SNTB1Q13884 538 aaKnown RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 STK11Q15831 433 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 HSPB2Q16082 182 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 HIST3H3Q16695 136 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ODF4Q2M2E3 257 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 KCTD21Q4G0X4 260 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 HIKESHIQ53FT3 197 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 C10orf128Q5T292 105 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 RIPPLY2Q5TAB7 128 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 OR2G6Q5TZ20 316 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 FAM90A2PQ658T7 463 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC18B1Q6NT16 456 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF773Q6PK81 442 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF322Q6U7Q0 402 aaPredicted RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 TFAP2EQ6VUC0 442 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 TMPRSS11AQ6ZMR5 421 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 PLEKHG7Q6ZR37 379 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SSX6Q7RTT6 188 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC16A14Q7RTX9 510 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 PRSS48Q7RTY5 328 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 DCXRQ7Z4W1 244 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ABHD12BQ7Z5M8 362 aaPredicted RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 KRT77Q7Z794 578 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 CDC20BQ86Y33 519 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 KLBQ86Z14 1044 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SKA3Q8IX90 412 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 TIGD4Q8IY51 512 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC22A24Q8N4F4 322 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 RFLNBQ8N5W9 214 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ACBD7Q8N6N7 88 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 NANOGP1Q8N7R0 232 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 YIPF7Q8N8F6 280 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ZFP41Q8N8Y5 198 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC26A10Q8NG04 563 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 OR2T27Q8NH04 317 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 AKR7LQ8NHP1 331 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 FGFBP3Q8TAT2 258 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 FNDC8Q8TC99 324 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SPRYD4Q8WW59 207 aaPredicted RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 RORBQ92753 470 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 TMIGD2Q96BF3 282 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 OR5M11Q96RB7 305 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 AMELYQ99218 206 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF416Q9BWM5 594 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 MRPS26Q9BYN8 205 aaKnown RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 LINC00470Q9BZP3 86 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 YIPF3Q9GZM5 350 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 RACGAP1Q9H0H5 632 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 C1orf198Q9H425 327 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF696Q9H7X3 374 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ISG20L2Q9H9L3 353 aaKnown RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SIAEQ9HAT2 523 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ELOVL3Q9HB03 270 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 VCX3AQ9NNX9 186 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 FGF20Q9NP95 211 aaPredicted RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 POLE4Q9NR33 117 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 PLSCR4Q9NRQ2 329 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 TMEM38BQ9NVV0 291 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 FKBP14Q9NWM8 211 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 SLCO1C1Q9NYB5 712 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 HAO2Q9NYQ3 351 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 CNOT2Q9NZN8 540 aaKnown RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 GNG8Q9UK08 70 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 GTF2A1LQ9UNN4 478 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 DIMT1Q9UNQ2 313 aaKnown RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 KLHDC2Q9Y2U9 406 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 MEMO1Q9Y316 297 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 UGT2A1Q9Y4X1 527 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms