RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CRISP1P54107 249 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 RPS7P62081 194 aaKnown RBP9.73□□□□□ -0.85
CDHR3-205ENST00000468143 LCN2P80188 198 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 SNAPC1Q16533 368 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 FAHD1Q6P587 224 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 MOGAT3Q86VF5 341 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 TIGD4Q8IY51 512 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 OR5K1Q8NHB7 308 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 THEM6Q8WUY1 208 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 RAB39BQ96DA2 213 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 NRBF2Q96F24 287 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 SIGLEC11Q96RL6 698 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 BRD7Q9NPI1 651 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 DNAJC27Q9NZQ0 273 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 PCDHB10Q9UN67 800 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 AP4S1Q9Y587 144 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 SONP18583 2426 aaKnown RBP9.72□□□□□ -0.85
CDHR3-205ENST00000468143 CD300LBA8K4G0 201 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 G3V2T6 193 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 TMEM178BH3BS89 294 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 PHF1O43189 567 aaPredicted RBP9.72□□□□□ -0.85
CDHR3-205ENST00000468143 HSD11B1P28845 292 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 OTX1P32242 354 aaPredicted RBP9.72□□□□□ -0.85
CDHR3-205ENST00000468143 PMELP40967 661 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 NAA10P41227 235 aaPredicted RBP9.72□□□□□ -0.85
CDHR3-205ENST00000468143 SLC15A1P46059 708 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 CX3CR1P49238 355 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 MMP16P51512 607 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 MAB21L1Q13394 359 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 PTGES3Q15185 160 aaKnown RBP9.72□□□□□ -0.85
CDHR3-205ENST00000468143 ZMYND11Q15326 602 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 ATP6AP1Q15904 470 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 FAM201AQ5SY85 155 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 PRAMEF6Q5VXH4 476 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 FAM57BQ71RH2 274 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 CXXC5Q7LFL8 322 aaKnown RBP9.72□□□□□ -0.85
CDHR3-205ENST00000468143 SHFQ7M4L6 423 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 LRRC28Q86X40 367 aaPredicted RBP9.72□□□□□ -0.85
CDHR3-205ENST00000468143 LRTOMTQ8WZ04 291 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 DVL3Q92997 716 aaPredicted RBP9.72□□□□□ -0.85
CDHR3-205ENST00000468143 SGK3Q96BR1 496 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 REPIN1Q9BWE0 567 aaKnown RBP9.72□□□□□ -0.85
CDHR3-205ENST00000468143 SEMA6AQ9H2E6 1030 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 MMADHCQ9H3L0 296 aaPredicted RBP9.72□□□□□ -0.85
CDHR3-205ENST00000468143 MARCH7Q9H992 704 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 SLC25A19Q9HC21 320 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 KLHDC2Q9Y2U9 406 aa9.72□□□□□ -0.85
CDHR3-205ENST00000468143 TRAV20A0A0B4J274 112 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 RNF212BA8MTL3 300 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 M0R129 80 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 AVPP01185 164 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 H2BFMP0C1H6 154 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 FASP25445 335 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 ZFP36P26651 326 aaKnown RBP9.71□□□□□ -0.86
CDHR3-205ENST00000468143 RAD23AP54725 363 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 SEC61A1P61619 476 aaKnown RBP9.71□□□□□ -0.86
CDHR3-205ENST00000468143 BTG1P62324 171 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 GRB2P62993 217 aaKnown RBP9.71□□□□□ -0.86
CDHR3-205ENST00000468143 HOXA4Q00056 320 aaPredicted RBP9.71□□□□□ -0.86
CDHR3-205ENST00000468143 APOFQ13790 326 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 OR8G1Q15617 311 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 GFOD2Q3B7J2 385 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 BCDIN3DQ7Z5W3 292 aaKnown RBP9.71□□□□□ -0.86
CDHR3-205ENST00000468143 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.71□□□□□ -0.86
CDHR3-205ENST00000468143 KLHL36Q8N4N3 616 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 C19orf18Q8NEA5 215 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 RNF133Q8WVZ7 376 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 TEX12Q9BXU0 123 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 METTL17Q9H7H0 456 aaPredicted RBP9.71□□□□□ -0.86
CDHR3-205ENST00000468143 G6PC2Q9NQR9 355 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 KRT84Q9NSB2 600 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 UFSP2Q9NUQ7 469 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 ZNF319Q9P2F9 582 aa9.71□□□□□ -0.86
CDHR3-205ENST00000468143 LOC105371242A0A075B767 164 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 PSMD9O00233 223 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 PRODHO43272 600 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 XRCC2O43543 280 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 PRKYO43930 277 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 CIB2O75838 187 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 LYNP07948 512 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 MRPL3P09001 348 aaKnown RBP9.7□□□□□ -0.86
CDHR3-205ENST00000468143 PCMT1P22061 227 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 SLC2A5P22732 501 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 EPHA2P29317 976 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 OPRL1P41146 370 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 ZNF121P58317 390 aaPredicted RBP9.7□□□□□ -0.86
CDHR3-205ENST00000468143 MPPED2Q15777 294 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 SLC35D3Q5M8T2 416 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 DCAF12L2Q5VW00 463 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 LRRN1Q6UXK5 716 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 C1orf229Q6ZS94 237 aaPredicted RBP9.7□□□□□ -0.86
CDHR3-205ENST00000468143 ASRGL1Q7L266 308 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 PRSS45Q7RTY3 260 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 ZDHHC13Q8IUH4 622 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 BOLLQ8N9W6 283 aaKnown RBP9.7□□□□□ -0.86
CDHR3-205ENST00000468143 DEFB108BQ8NET1 73 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 OR56B2PQ8NGI1 322 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 OTOSQ8NHW6 89 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 DNAJC9Q8WXX5 260 aa9.7□□□□□ -0.86
CDHR3-205ENST00000468143 DUS3LQ96G46 650 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms