RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 ZNF799Q96GE5 643 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 SSBP3Q9BWW4 388 aaPredicted RBP12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 HCAR1Q9BXC0 346 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 TRIM15Q9C019 465 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 MUC13Q9H3R2 512 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 DDX28Q9NUL7 540 aaKnown RBP12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 UFSP2Q9NUQ7 469 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 IL20Q9NYY1 176 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 OR5V1Q9UGF6 321 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 LRCH1Q9Y2L9 728 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 COMMD3-BMI1R4GMX3 469 aa12.33□□□□□ -0.44
ATPAF2-204ENST00000467560 DNAJC9-AS1A6NH13 148 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 CD300LBA8K4G0 201 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 IFNL4K9M1U5 179 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 FAM20BO75063 409 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 KRT36O76013 467 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 SOX14O95416 240 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 SLC2A1P11166 492 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 OTX1P32242 354 aaPredicted RBP12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 CD200P41217 278 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 TPTEP56180 551 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 MS4A2Q01362 244 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 CRMP1Q14194 572 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 GLYATL3Q5SZD4 288 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 ZNF841Q6ZN19 808 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 PGAP1Q75T13 922 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 C3orf56Q8N813 242 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 AQP11Q8NBQ7 271 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 Q8TCH9 128 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 MRI1Q9BV20 369 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 NMNAT2Q9BZQ4 307 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 NTN4Q9HB63 628 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 ARMC1Q9NVT9 282 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 TAS2R1Q9NYW7 299 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 ACTR3BQ9P1U1 418 aa12.32□□□□□ -0.44
ATPAF2-204ENST00000467560 IGHV2-70DA0A0C4DH43 119 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 MDFIC2A0A1B0GVS7 189 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 CCNB2O95067 398 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 ZNF823P16415 610 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 MALLQ13021 153 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 RASSF6Q6ZTQ3 369 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 SPATC1Q76KD6 591 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 DCXRQ7Z4W1 244 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 LNX2Q8N448 690 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 OR52L1Q8NGH7 329 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 OR2T4Q8NH00 348 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 SPRYD4Q8WW59 207 aaPredicted RBP12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 NEIL1Q96FI4 390 aaPredicted RBP12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 TSSK6Q9BXA6 273 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 MMADHCQ9H3L0 296 aaPredicted RBP12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 TBC1D23Q9NUY8 699 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 MIOXQ9UGB7 285 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 KCNG2Q9UJ96 466 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 U3KQV3 271 aa12.31□□□□□ -0.44
ATPAF2-204ENST00000467560 LRRC30A6NM36 301 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 C22orf46C9J442 243 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 EBAG9O00559 213 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 FCN3O75636 299 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 FSTL3O95633 263 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 PTBP3O95758 552 aaKnown RBP12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 SPARCP09486 303 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 SPI1P17947 270 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 PRTN3P24158 256 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 PITPNBP48739 271 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 PRKXP51817 358 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 GNB2P62879 340 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 CBX1P83916 185 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 OR8G1Q15617 311 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 PCK2Q16822 640 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 LINC01590Q5TEZ4 76 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 WDR25Q64LD2 544 aaPredicted RBP12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 SFRP4Q6FHJ7 346 aaPredicted RBP12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 LCN8Q6JVE9 175 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 MRPL21Q7Z2W9 205 aaKnown RBP12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 PARP8Q8N3A8 854 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 CELF2-AS1Q8N7Q2 184 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 RAB40AQ8WXH6 277 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 SPTSSAQ969W0 71 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 UPRTQ96BW1 309 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 SLAMF6Q96DU3 332 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 CTSZQ9UBR2 303 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 PCDHGB1Q9Y5G3 927 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 N6AMT1Q9Y5N5 214 aa12.3□□□□□ -0.44
ATPAF2-204ENST00000467560 KIR2DS1A0A191URI9 304 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 ZNF593O00488 134 aaPredicted RBP12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 TNFRSF13BO14836 293 aaPredicted RBP12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 GYG2O15488 501 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 PLATP00750 562 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 HKR1P10072 659 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 HOXB6P17509 224 aaKnown RBP12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 PSMB10P40306 273 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 BAMBIQ13145 260 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 SLC9A3R2Q15599 337 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 MICAQ29983 383 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 RPL13AP3Q6NVV1 102 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 DRAM2Q6UX65 266 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 LRRN1Q6UXK5 716 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 RBMS3Q6XE24 437 aaKnown RBP12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 ZNF826PQ6ZT77 177 aa12.29□□□□□ -0.44
ATPAF2-204ENST00000467560 IQCF1Q8N6M8 205 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms