RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 AVPI1Q5T686 147 aa11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 KDM4DQ6B0I6 523 aa11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 PGAP1Q75T13 922 aa11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 TIGD4Q8IY51 512 aa11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 PARP8Q8N3A8 854 aa11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 BHLHE23Q8NDY6 225 aa11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 ST7LQ8TDW4 575 aa11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 ZNF418Q8TF45 676 aaPredicted RBP11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 TIMD4Q96H15 378 aa11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 JMJD8Q96S16 334 aa11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 KCNJ15Q99712 375 aa11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 ABHD6Q9BV23 337 aa11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 DDX28Q9NUL7 540 aaKnown RBP11.9□□□□□ -0.5
CCHCR1-211ENST00000467553 DYSFO75923 2080 aa11.9□□□□□ -0.51
CCHCR1-211ENST00000467553 FAM157AC9JC47 383 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 CLDN25C9JDP6 229 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 H0YL77 283 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 J3QLI3 93 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 WNT9BO14905 357 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 PRODHO43272 600 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 ADH4P08319 380 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 SLC2A1P11166 492 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 SELEP16581 610 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 HSD11B1P28845 292 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 EPHA2P29317 976 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 NAA10P41227 235 aaPredicted RBP11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 SLC15A1P46059 708 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 GK2Q14410 553 aaPredicted RBP11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 SLC35D3Q5M8T2 416 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 DRAM2Q6UX65 266 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 MRPL21Q7Z2W9 205 aaKnown RBP11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 TCEANCQ8N8B7 351 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 OR8G5Q8NG78 346 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 OR13G1Q8NGZ3 307 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 ITLN1Q8WWA0 313 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 RAB1CQ92928 201 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 TEAD3Q99594 435 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 PKP2Q99959 881 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 GABARAPL1Q9H0R8 117 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 METTL17Q9H7H0 456 aaPredicted RBP11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 ZNF665Q9H7R5 613 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 MARCH7Q9H992 704 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 TMEM100Q9NV29 134 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 H2AFY2Q9P0M6 372 aaPredicted RBP11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 OAZ3Q9UMX2 235 aa11.89□□□□□ -0.51
CCHCR1-211ENST00000467553 C5orf63A6NC05 138 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 IQCF6A8MYZ5 107 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 TBX1O43435 398 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 PRKYO43930 277 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 ANXA2P07355 339 aaKnown RBP11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 CD55P08174 381 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 H2BFMP0C1H6 154 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 OTX1P32242 354 aaPredicted RBP11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 HCCSP53701 268 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 GRB2P62993 217 aaKnown RBP11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 HNRNPA0Q13151 305 aaKnown RBP11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 SNAI3Q3KNW1 292 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 BCDIN3DQ7Z5W3 292 aaKnown RBP11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 C10orf67Q8IYJ2 551 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 OR2AE1Q8NHA4 323 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 SPRYD4Q8WW59 207 aaPredicted RBP11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 AMELYQ99218 206 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 CIB1Q99828 191 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 PRRG3Q9BZD7 231 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 BRD7Q9NPI1 651 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 DNAJC27Q9NZQ0 273 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 IL19Q9UHD0 177 aa11.88□□□□□ -0.51
CCHCR1-211ENST00000467553 A0A0G2JMP0 313 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 IGHV3-64DA0A0J9YX35 117 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 A0A0X1KG70 313 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 GGT3PA6NGU5 568 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 ZAR1LA6NP61 321 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 M0R129 80 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 LYNP07948 512 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 MRPL3P09001 348 aaKnown RBP11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 TNFRSF1AP19438 455 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 SLC2A5P22732 501 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 ANOS1P23352 680 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 POLR2IP36954 125 aaKnown RBP11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 RBMXP38159 391 aaKnown RBP11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 CX3CR1P49238 355 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 COMPP49747 757 aaPredicted RBP11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 SRSF2Q01130 221 aaKnown RBP11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 ZNF92Q03936 586 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 GLYATL3Q5SZD4 288 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 SLX4IPQ5VYV7 408 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 ZFP1Q6P2D0 407 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 FAHD2BQ6P2I3 314 aaPredicted RBP11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 C12orf54Q6X4T0 127 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 PEG10Q86TG7 708 aaKnown RBP11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 ZNF454Q8N9F8 522 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 SEMA6DQ8NFY4 1073 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 OR4M2Q8NGB6 313 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 OR10AD1Q8NGE0 317 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 OTOSQ8NHW6 89 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 RNF133Q8WVZ7 376 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 FAHD2AQ96GK7 314 aa11.87□□□□□ -0.51
CCHCR1-211ENST00000467553 RAB3IPQ96QF0 476 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms