RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 TRAPPC6BQ86SZ2 158 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 GVQW1Q8N7I0 195 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 ZNF248Q8NDW4 579 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 RNF133Q8WVZ7 376 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 FBXW5Q969U6 566 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 CMBLQ96DG6 245 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 FAHD2AQ96GK7 314 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 SEC22AQ96IW7 307 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 MESP1Q9BRJ9 268 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 PDCD10Q9BUL8 212 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 SLC26A1Q9H2B4 701 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 FAM206AQ9NX38 181 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 COMMD9Q9P000 198 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 M0R296 226 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 DNASE2O00115 360 aaPredicted RBP13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 LIPCP11150 499 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 HSD11B1P28845 292 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 BDKRB2P30411 391 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 STARP49675 285 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 DNM1P34Q6PK57 102 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 NUBPLQ8TB37 319 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 NKD1Q969G9 470 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 FGGYQ96C11 551 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 NECAB3Q96P71 396 aaPredicted RBP13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 NPAS1Q99742 590 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 ZC4H2Q9NQZ6 224 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 ASCC3Q8N3C0 2202 aaKnown RBP13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 MYO15AQ9UKN7 3530 aa13.09□□□□□ -0.31
PRPF38B-204ENST00000467302 NPIPB13A6NJU9 1138 aa13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 NPIPB4C9JG80 1138 aa13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 TSPAN9O75954 239 aa13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 GP1BAP07359 652 aa13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 DLSTP36957 453 aa13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 LRRC37A5PQ49AS3 106 aa13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 SLC22A6Q4U2R8 563 aa13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 C16orf47Q6ZP98 133 aaPredicted RBP13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 OR2W3Q7Z3T1 314 aa13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 OR52N4Q8NGI2 321 aa13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 THAP3Q8WTV1 239 aaPredicted RBP13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 FAM46BQ96A09 425 aa13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 TAS2R3Q9NYW6 316 aa13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 C19orf25Q9UFG5 118 aaPredicted RBP13.08□□□□□ -0.31
PRPF38B-204ENST00000467302 EXPH5Q8NEV8 1989 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 OR2AT4A6NND4 320 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 NPIPA5E9PKD4 350 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 SULT2B1O00204 365 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 STK17BO94768 372 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 BPNT1O95861 308 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 VSIG8P0DPA2 414 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 CASRP41180 1078 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 DAP3P51398 398 aaKnown RBP13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 PPIAP62937 165 aaKnown RBP13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 PAN3Q58A45 887 aaKnown RBP13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 OR52W1Q6IF63 320 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 LCN10Q6JVE6 187 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 ZNF529Q6P280 563 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 H1FNTQ75WM6 255 aaPredicted RBP13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 CPEB2Q7Z5Q1 589 aaKnown RBP13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 TMEM17Q86X19 198 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 MISPQ8IVT2 679 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 BPIFCQ8NFQ6 507 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 NUDCD2Q8WVJ2 157 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 ARL5BQ96KC2 179 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 SPSB2Q99619 263 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 PHB2Q99623 299 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 UQCC2Q9BRT2 126 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 CRB3Q9BUF7 120 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 ZNF471Q9BX82 626 aaPredicted RBP13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 FAM117AQ9C073 453 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 NPIPA1Q9UND3 350 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 PLEKHA6Q9Y2H5 1048 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 HRH3Q9Y5N1 445 aa13.08□□□□□ -0.32
PRPF38B-204ENST00000467302 TRBV11-1A0A0K0K1C0 115 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 MPTX1A8MV57 137 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 SIGLEC5O15389 551 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 EFSO43281 561 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 TTRP02766 147 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 H2BFMP0C1H6 154 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 HRH1P35367 487 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 IL13RA1P78552 427 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 ZNF528Q3MIS6 628 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 BEX5Q5H9J7 111 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 ELP2Q6IA86 826 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 SLC22A24Q8N4F4 322 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 AGBL5Q8NDL9 886 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 MFSD8Q8NHS3 518 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 TMEM234Q8WY98 164 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 ADAT3Q96EY9 351 aaPredicted RBP13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 LRRC46Q96FV0 321 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 WDR77Q9BQA1 342 aaPredicted RBP13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 NUDT16L1Q9BRJ7 211 aaKnown RBP13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 PTGES2Q9H7Z7 377 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 FN3KRPQ9HA64 309 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 FBLN5Q9UBX5 448 aa13.07□□□□□ -0.32
PRPF38B-204ENST00000467302 LOC100509620A0A075B734 347 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 DBX1A6NMT0 343 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 EIF1AYO14602 144 aaKnown RBP13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 ICAM2P13598 275 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 AVPR2P30518 371 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 EIF1AXP47813 144 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms