RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 PLXNB1O43157 2135 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 IGLV3-9A0A075B6K5 115 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 A0A0U1RQV5 110 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 TMEM120BA0PK00 339 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 WDR91A4D1P6 747 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 HELTA6NFD8 242 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 TMEM210A6NLX4 147 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 TRIM49D1C9J1S8 452 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 NR5A2O00482 541 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 LDLRAD4O15165 306 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ST8SIA3O43173 380 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 PIAS1O75925 651 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 HMGN2P05204 90 aaKnown RBP4.53□□□□□ -1.68
PTCD3-207ENST00000467273 GPIP06744 558 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 CHRM4P08173 479 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 GUSBP08236 651 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 CALCBP10092 127 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 TCN1P20061 433 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-207ENST00000467273 HMOX2P30519 316 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 SSTR1P30872 391 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 HSD17B3P37058 310 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ARHGDIAP52565 204 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 KRTAP10-3P60369 221 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 EFNB1P98172 346 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 GALK2Q01415 458 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 GUCY2DQ02846 1103 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 PAX8Q06710 450 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF141Q15928 474 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 C6orf136Q5SQH8 315 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 THEM4Q5T1C6 240 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 AVPI1Q5T686 147 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 C3orf62Q6ZUJ4 267 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 EIF3MQ7L2H7 374 aaKnown RBP4.53□□□□□ -1.68
PTCD3-207ENST00000467273 MYPOPQ86VE0 399 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-207ENST00000467273 KLBQ86Z14 1044 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ZDHHC21Q8IVQ6 265 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 UEVLDQ8IX04 471 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 CTAGE3PQ8IX95 158 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 PARP8Q8N3A8 854 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 PAQR4Q8N4S7 273 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF614Q8N883 585 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ASCC1Q8N9N2 400 aaKnown RBP4.53□□□□□ -1.68
PTCD3-207ENST00000467273 SCAIQ8N9R8 606 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 FAM71CQ8NEG0 241 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 OR52E2Q8NGJ4 325 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 LINC01006Q8NI28 216 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 CD300LFQ8TDQ1 290 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 SSMEM1Q8WWF3 244 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 CDS1Q92903 461 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 UPRTQ96BW1 309 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 MTERF3Q96E29 417 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ELMOD3Q96FG2 381 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 MS4A14Q96JA4 679 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF479Q96JC4 524 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF385AQ96PM9 386 aaKnown RBP4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ASCL2Q99929 193 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 A4GALTQ9NPC4 353 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 HINT3Q9NQE9 182 aaKnown RBP4.53□□□□□ -1.68
PTCD3-207ENST00000467273 EXOSC3Q9NQT5 275 aaKnown RBP4.53□□□□□ -1.68
PTCD3-207ENST00000467273 CTPS2Q9NRF8 586 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ZDHHC18Q9NUE0 388 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 PEMTQ9UBM1 199 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 SLC7A8Q9UHI5 535 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF225Q9UK10 706 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 SLC35A3Q9Y2D2 325 aa4.53□□□□□ -1.68
PTCD3-207ENST00000467273 TET2Q6N021 2002 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 OR6C68A6NDL8 312 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 CXorf65A6NEN9 183 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 DUXAA6NLW8 204 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF99A8MXY4 864 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 C3orf84H3BNL1 204 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 H3BQF6 201 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 FAAHO00519 579 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 RSL1D1O76021 490 aaKnown RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 OR4F21O95013 312 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 BCKDHAP12694 445 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF250P15622 560 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF14P17017 642 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 POU1F1P28069 291 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 TACR3P29371 465 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 STX2P32856 288 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 MAGEB1P43366 347 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 GPR4P46093 362 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 SERPINB8P50452 374 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF75DP51815 510 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 POLR2HP52434 150 aaKnown RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 PKNOX1P55347 436 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 KLF3P57682 345 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 CCL8P80075 99 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 ROR2Q01974 943 aaKnown RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 CALCOCO2Q13137 446 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 FADDQ13158 208 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 MAD2L1BPQ15013 274 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 GSG1Q2KHT4 349 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 NDUFAF6Q330K2 333 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 KLHL22Q53GT1 634 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 PHYHD1Q5SRE7 291 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 PDZK1Q5T2W1 519 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 AGBL2Q5U5Z8 902 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 PRAMEF8Q5VWM4 474 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms