RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 IGHA1P01876 353 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 MT-ND5P03915 603 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 NAT2P11245 290 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 SELEP16581 610 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 LIPAP38571 399 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 MMP15P51511 669 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 MMP16P51512 607 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 ZNF92Q03936 586 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 ZNF829Q3KNS6 432 aaPredicted RBP12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 OR2T2Q6IF00 324 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 PLEKHG7Q6ZR37 379 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 PGAP1Q75T13 922 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 YIPF7Q8N8F6 280 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 SGK3Q96BR1 496 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 SORCS2Q96PQ0 1159 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 REPIN1Q9BWE0 567 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 ANKRD60Q9BZ19 345 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 CXXC4Q9H2H0 198 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 TPK1Q9H3S4 243 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 FGF20Q9NP95 211 aaPredicted RBP12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 INPP5EQ9NRR6 644 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 CYSLTR2Q9NS75 346 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 FAM206AQ9NX38 181 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 ZNF319Q9P2F9 582 aa12.35□□□□□ -0.43
DNMT3A-208ENST00000466601 USF3Q68DE3 2245 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 NOTCH2Q04721 2471 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 C17orf100A8MU93 164 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 SRSF10O75494 262 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 RPP14O95059 124 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 PNPP00491 289 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 IGHV4-39P01824 125 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 ERCC1P07992 297 aaPredicted RBP12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 MYF6P23409 242 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 ZNF81P51508 661 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 EFNA4P52798 201 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 PRSS12P56730 875 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 SNCBQ16143 134 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 TIGD6Q17RP2 521 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 CDONQ4KMG0 1287 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 TP53I3Q53FA7 332 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 LIPNQ5VXI9 398 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 KCTD20Q7Z5Y7 419 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 LHFPL3Q86UP9 236 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 OR5AS1Q8N127 324 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 OR8B12Q8NGG6 310 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 GTF3AQ92664 365 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 GGHQ92820 318 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 SPSB4Q96A44 273 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 MRPL48Q96GC5 212 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 REEP6Q96HR9 211 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 MYCBPQ99417 103 aaPredicted RBP12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 OPA3Q9H6K4 179 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 BARX1Q9HBU1 254 aaPredicted RBP12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 PLCXD1Q9NUJ7 323 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 CGGBP1Q9UFW8 167 aaPredicted RBP12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 GNG8Q9UK08 70 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 RAB26Q9ULW5 256 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 R4GMQ9 66 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 CSMD2Q7Z408 3487 aa12.34□□□□□ -0.43
DNMT3A-208ENST00000466601 EFCAB10A6NFE3 127 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 GGT3PA6NGU5 568 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 IQCF6A8MYZ5 107 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 LOC110117498-PIK3R3F6TDL0 507 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 SPRY3O43610 288 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 XPNPEP2O43895 674 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 FAM20BO75063 409 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 F12P00748 615 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 TACSTD2P09758 323 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 CFL1P23528 166 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 DCKP27707 260 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 CSNK2BP67870 215 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 MFGE8Q08431 387 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 GALEQ14376 348 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 GFOD2Q3B7J2 385 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 ZMAT1Q5H9K5 638 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 C6orf141Q5SZD1 244 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 SHEQ5VZ18 495 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 FAM220AQ7Z4H9 259 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 BPIFB6Q8NFQ5 453 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 OR8G5Q8NG78 346 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 NEU4Q8WWR8 484 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 SIGLEC11Q96RL6 698 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 RHNO1Q9BSD3 238 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 ALG8Q9BVK2 526 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 PBOV1Q9GZY1 135 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 RASSF4Q9H2L5 321 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 RGCCQ9H4X1 137 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 MSL2Q9HCI7 577 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 ERVK13-1Q9NX77 482 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 GTF2A1LQ9UNN4 478 aa12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 ANKRD17O75179 2603 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-208ENST00000466601 ZSCAN5BA6NJL1 495 aa12.32□□□□□ -0.44
DNMT3A-208ENST00000466601 CD300LBA8K4G0 201 aa12.32□□□□□ -0.44
DNMT3A-208ENST00000466601 J3QLW9 94 aa12.32□□□□□ -0.44
DNMT3A-208ENST00000466601 SSX4O60224 188 aa12.32□□□□□ -0.44
DNMT3A-208ENST00000466601 LY6HO94772 140 aa12.32□□□□□ -0.44
DNMT3A-208ENST00000466601 IGHV1-46P01743 117 aa12.32□□□□□ -0.44
DNMT3A-208ENST00000466601 PIPP12273 146 aaPredicted RBP12.32□□□□□ -0.44
DNMT3A-208ENST00000466601 ZNF19P17023 458 aa12.32□□□□□ -0.44
DNMT3A-208ENST00000466601 OR12D2P58182 307 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms