RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 MMADHCQ9H3L0 296 aaPredicted RBP17.1■□□□□ 0.33
COL6A1-203ENST00000466285 ADA2Q9NZK5 511 aa17.1■□□□□ 0.33
COL6A1-203ENST00000466285 DUX4Q9UBX2 424 aa17.1■□□□□ 0.33
COL6A1-203ENST00000466285 FAM32AQ9Y421 112 aaKnown RBP17.1■□□□□ 0.33
COL6A1-203ENST00000466285 TVP23AA6NH52 213 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 PHYHO14832 338 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 ARPC3O15145 178 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 SLC6A6P31641 620 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 CFHR2P36980 270 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 MTNR1AP48039 350 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 DEFA6Q01524 100 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 GLYATL3Q5SZD4 288 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 PGM2L1Q6PCE3 622 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 ZNF620Q6ZNG0 422 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 OR8D4Q8NGM9 314 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 TECTBQ96PL2 329 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 PCGF1Q9BSM1 259 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 ADAT1Q9BUB4 502 aaKnown RBP17.09■□□□□ 0.33
COL6A1-203ENST00000466285 PRDM13Q9H4Q3 707 aa17.09■□□□□ 0.33
COL6A1-203ENST00000466285 PDP1Q9P0J1 537 aaPredicted RBP17.09■□□□□ 0.33
COL6A1-203ENST00000466285 LRRC30A6NM36 301 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 SRRM5B3KS81 715 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 M0R135 149 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 GADD45GO95257 159 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 FSTL3O95633 263 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 RENP00797 406 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 SLC2A1P11166 492 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 GSSP48637 474 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL6A1-203ENST00000466285 C16orf87Q6PH81 154 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 FIP1L1Q6UN15 594 aaKnown RBP17.08■□□□□ 0.32
COL6A1-203ENST00000466285 PGAP1Q75T13 922 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 NLRC3Q7RTR2 1065 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 WDR86Q86TI4 376 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 KIR3DL3Q8N743 410 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 OR51L1Q8NGJ5 315 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 ZNF799Q96GE5 643 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 PLEKHA8Q96JA3 519 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 DDOQ99489 341 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 PPP1R3EQ9H7J1 279 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 SPAG4Q9NPE6 437 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 C1RLQ9NZP8 487 aa17.08■□□□□ 0.32
COL6A1-203ENST00000466285 SAMD4AQ9UPU9 718 aaKnown RBP17.08■□□□□ 0.32
COL6A1-203ENST00000466285 CD300LBA8K4G0 201 aa17.07■□□□□ 0.32
COL6A1-203ENST00000466285 TNFRSF13BO14836 293 aaPredicted RBP17.07■□□□□ 0.32
COL6A1-203ENST00000466285 OR10H3O60404 316 aa17.07■□□□□ 0.32
COL6A1-203ENST00000466285 HLA-DQA2P01906 255 aa17.07■□□□□ 0.32
COL6A1-203ENST00000466285 MELTFP08582 738 aa17.07■□□□□ 0.32
COL6A1-203ENST00000466285 PRB3Q04118 309 aaPredicted RBP17.07■□□□□ 0.32
COL6A1-203ENST00000466285 POU4F2Q12837 409 aa17.07■□□□□ 0.32
COL6A1-203ENST00000466285 OR8G1Q15617 311 aa17.07■□□□□ 0.32
COL6A1-203ENST00000466285 PGBD2Q6P3X8 592 aa17.07■□□□□ 0.32
COL6A1-203ENST00000466285 MRPL21Q7Z2W9 205 aaKnown RBP17.07■□□□□ 0.32
COL6A1-203ENST00000466285 C1orf87Q8N0U7 546 aa17.07■□□□□ 0.32
COL6A1-203ENST00000466285 OR9Q2Q8NGE9 314 aa17.07■□□□□ 0.32
COL6A1-203ENST00000466285 IGHV3OR15-7A0A075B7D8 119 aa17.06■□□□□ 0.32
COL6A1-203ENST00000466285 ENSAO43768 121 aaKnown RBP17.06■□□□□ 0.32
COL6A1-203ENST00000466285 CCDC22O60826 627 aa17.06■□□□□ 0.32
COL6A1-203ENST00000466285 PTBP3O95758 552 aaKnown RBP17.06■□□□□ 0.32
COL6A1-203ENST00000466285 RRM2P31350 389 aa17.06■□□□□ 0.32
COL6A1-203ENST00000466285 RAG2P55895 527 aa17.06■□□□□ 0.32
COL6A1-203ENST00000466285 PDLIM3Q53GG5 364 aaPredicted RBP17.06■□□□□ 0.32
COL6A1-203ENST00000466285 ZNF362Q5T0B9 420 aaPredicted RBP17.06■□□□□ 0.32
COL6A1-203ENST00000466285 LNX2Q8N448 690 aa17.06■□□□□ 0.32
COL6A1-203ENST00000466285 CELF2-AS1Q8N7Q2 184 aa17.06■□□□□ 0.32
COL6A1-203ENST00000466285 OR9Q1Q8NGQ5 310 aa17.06■□□□□ 0.32
COL6A1-203ENST00000466285 OR11L1Q8NGX0 322 aa17.06■□□□□ 0.32
COL6A1-203ENST00000466285 SPRYD4Q8WW59 207 aaPredicted RBP17.06■□□□□ 0.32
COL6A1-203ENST00000466285 PYURFQ96I23 114 aa17.06■□□□□ 0.32
COL6A1-203ENST00000466285 CENPVL3A0A0U1RRI6 287 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 POM121CA8CG34 1229 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 ARPC2O15144 300 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 GYPAP02724 150 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 IRF2P14316 349 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 OTX1P32242 354 aaPredicted RBP17.05■□□□□ 0.32
COL6A1-203ENST00000466285 Q6YL49 198 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 RHOUQ7L0Q8 258 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 PDZD9Q8IXQ8 264 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 GCSAMQ8N6F7 178 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 OR56B2PQ8NGI1 322 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 OR2AJ1Q8NGZ0 328 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 ZDHHC16Q969W1 377 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 BTBD10Q9BSF8 475 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 SIRPDQ9H106 197 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 SLITRK2Q9H156 845 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 C1orf123Q9NWV4 160 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 RNF7Q9UBF6 113 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 COMMD3-BMI1R4GMX3 469 aa17.05■□□□□ 0.32
COL6A1-203ENST00000466285 ZNF879B4DU55 563 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 LGALS8O00214 317 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 BHLHE40O14503 412 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 ADAM20O43506 726 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 GYPBP06028 91 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 CPT2P23786 658 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 DLX1P56177 255 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 KRT72Q14CN4 511 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 MIDNQ504T8 468 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 GPR157Q5UAW9 335 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 FAM90A1Q86YD7 464 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 SEH1LQ96EE3 360 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms