RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SPI1P17947 270 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 GRK5P34947 590 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 GGT2P36268 569 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 EVX1P49640 407 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 CCL8P80075 99 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 COX10Q12887 443 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 GINS1Q14691 196 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 TBCEQ15813 527 aaPredicted RBP8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 KCNMB1Q16558 191 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 KLHL12Q53G59 568 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 XAF1Q6GPH4 301 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 SLC18B1Q6NT16 456 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 ACSM5Q6NUN0 579 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 SLC27A4Q6P1M0 643 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 BPIFB6Q8NFQ5 453 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 OR6N2Q8NGY6 317 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 MARS2Q96GW9 593 aaKnown RBP8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 WACQ9BTA9 647 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 HCAR1Q9BXC0 346 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 PRRG3Q9BZD7 231 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 HDHD2Q9H0R4 259 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 MSL2Q9HCI7 577 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 YAE1D1Q9NRH1 226 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 IMPAD1Q9NX62 359 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 SLCO1C1Q9NYB5 712 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 TREM2Q9NZC2 230 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 CNOT2Q9NZN8 540 aaKnown RBP8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 GPR160Q9UJ42 338 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 FBXO9Q9UK97 447 aaPredicted RBP8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 N6AMT1Q9Y5N5 214 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 DYSFO75923 2080 aa8.32□□□□□ -1.08
RTFDC1-205ENST00000466260 A0A096LNT2 108 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 IGHV4-61A0A0C4DH41 118 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 LOC390937A0A1W2PQ73 354 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 PLSCR5A0PG75 271 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 LRP5LA4QPB2 252 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 OR6C6A6NF89 314 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 ZSCAN5BA6NJL1 495 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 SNTNA6NMZ2 147 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 C17orf100A8MU93 164 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 M0R129 80 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 MT-ND5P03915 603 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 USF1P22415 310 aaPredicted RBP8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 COL8A2P25067 703 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 FMO3P31513 532 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 NR4A2P43354 598 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 SLC6A9P48067 706 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 DAPP51397 102 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 ZNF81P51508 661 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 RPS7P62081 194 aaKnown RBP8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 KRTAP1-1Q07627 177 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 HNRNPA0Q13151 305 aaKnown RBP8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 RGS21Q2M5E4 152 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 TMEM249Q2WGJ8 235 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 ZNF362Q5T0B9 420 aaPredicted RBP8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 UBE2UQ5VVX9 321 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 PLBD1Q6P4A8 553 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 DCXRQ7Z4W1 244 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 TBC1D15Q8TC07 691 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 YIPF5Q969M3 257 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 CMBLQ96DG6 245 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 PLEKHA8Q96JA3 519 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 MAP6Q96JE9 813 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 DDOQ99489 341 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 COQ7Q99807 217 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 ATF6BQ99941 703 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 DCUN1D5Q9BTE7 237 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 FUNDC2Q9BWH2 189 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 TEX12Q9BXU0 123 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 MYOZ1Q9NP98 299 aaPredicted RBP8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 HINT3Q9NQE9 182 aaKnown RBP8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 CMC2Q9NRP2 79 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 CENPMQ9NSP4 180 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 DECR2Q9NUI1 292 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 STARD10Q9Y365 291 aa8.31□□□□□ -1.08
RTFDC1-205ENST00000466260 PNMA8CA0A1B0GUJ8 204 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 PTGES3LE9PB15 166 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 PRR23D1E9PI22 279 aaPredicted RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 E9PQ18 207 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 NDUFS8O00217 210 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 SURF4O15260 269 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 PPIHO43447 177 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 MITFO75030 526 aaPredicted RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 IGHV3-13P01766 116 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 LCATP04180 440 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 PRR23D2P0DMB1 279 aaPredicted RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 SLC2A1P11166 492 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 PCMT1P22061 227 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 PAICSP22234 425 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 RBMXP38159 391 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 NAA10P41227 235 aaPredicted RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 GPR6P46095 362 aaPredicted RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 ENTPD1P49961 510 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 PRKXP51817 358 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 HIST1H3AP68431 136 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 PSG7Q13046 419 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 EIF2B1Q14232 305 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 HLXQ14774 488 aaPredicted RBP8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 TAF13Q15543 124 aa8.3□□□□□ -1.08
RTFDC1-205ENST00000466260 AVPI1Q5T686 147 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms