RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 CD37P11049 281 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 CEACAM1P13688 526 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 PPIAP62937 165 aaKnown RBP16.06■□□□□ 0.16
COL9A3-205ENST00000466192 GRB2P62993 217 aaKnown RBP16.06■□□□□ 0.16
COL9A3-205ENST00000466192 ARG2P78540 354 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 FAM27BQ5VT28 67 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.06■□□□□ 0.16
COL9A3-205ENST00000466192 ZFP62Q8NB50 900 aaPredicted RBP16.06■□□□□ 0.16
COL9A3-205ENST00000466192 AKAP1Q92667 903 aaKnown RBP eCLIP16.06■□□□□ 0.162e-7■□□□□ 10.8
COL9A3-205ENST00000466192 HAS2Q92819 552 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 FBXO17Q96EF6 278 aa16.06■□□□□ 0.16
COL9A3-205ENST00000466192 ALKBH3Q96Q83 286 aaPredicted RBP16.06■□□□□ 0.16
COL9A3-205ENST00000466192 TRAV18A0A075B6X5 111 aa16.05■□□□□ 0.16
COL9A3-205ENST00000466192 A0A1B0GVI7 797 aa16.05■□□□□ 0.16
COL9A3-205ENST00000466192 CIB4A0PJX0 185 aa16.05■□□□□ 0.16
COL9A3-205ENST00000466192 ANKRD20A5PA0PJZ0 165 aa16.05■□□□□ 0.16
COL9A3-205ENST00000466192 NOVA1P51513 510 aaKnown RBP16.05■□□□□ 0.16
COL9A3-205ENST00000466192 FAAP20Q6NZ36 180 aa16.05■□□□□ 0.16
COL9A3-205ENST00000466192 TMPRSS7Q7RTY8 843 aa16.05■□□□□ 0.16
COL9A3-205ENST00000466192 ABHD12BQ7Z5M8 362 aaPredicted RBP16.05■□□□□ 0.16
COL9A3-205ENST00000466192 ZNF283Q8N7M2 679 aa16.05■□□□□ 0.16
COL9A3-205ENST00000466192 ASCC1Q8N9N2 400 aaKnown RBP16.05■□□□□ 0.16
COL9A3-205ENST00000466192 SOX7Q9BT81 388 aa16.05■□□□□ 0.16
COL9A3-205ENST00000466192 NKIRAS2Q9NYR9 191 aa16.05■□□□□ 0.16
COL9A3-205ENST00000466192 URB1O60287 2271 aaKnown RBP16.05■□□□□ 0.16
COL9A3-205ENST00000466192 CTSSP25774 331 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 BDKRB2P30411 391 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 GPR137CQ8N3F9 429 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 OR4D6Q8NGJ1 314 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 SCMH1Q96GD3 660 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 CSAG2Q9Y5P2 127 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 E9PLN8 166 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 H2AFB2P0C5Z0 115 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 MRPS15P82914 257 aaKnown RBP16.04■□□□□ 0.16
COL9A3-205ENST00000466192 RSPO1Q2MKA7 263 aaPredicted RBP16.04■□□□□ 0.16
COL9A3-205ENST00000466192 GFOD2Q3B7J2 385 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 ZNF766Q5HY98 468 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 FAM209AQ5JX71 171 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 OR10K2Q6IF99 312 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 ZNF813Q6ZN06 617 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 FAM57BQ71RH2 274 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 BTN2A1Q7KYR7 527 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 NAA40Q86UY6 237 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 NKAIN3Q8N8D7 197 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 CPT1CQ8TCG5 803 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 SLC17A5Q9NRA2 495 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 TMEM38BQ9NVV0 291 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 LIPGQ9Y5X9 500 aa16.04■□□□□ 0.16
COL9A3-205ENST00000466192 FAM186AA6NE01 2351 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 LOC390937A0A1W2PQ73 354 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 C5orf63A6NC05 138 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 TPPPO94811 219 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 ALX3O95076 343 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 CCL11P51671 97 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 GUCA2AQ02747 115 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 SMUG1Q53HV7 270 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 LYPD6Q86Y78 171 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 MEIOBQ8N635 442 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 OR52N4Q8NGI2 321 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 OR5D14Q8NGL3 314 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 OR13C9Q8NGT0 318 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 SORCS2Q96PQ0 1159 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 C20orf85Q9H1P6 137 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 GPR84Q9NQS5 396 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 PRRC2CQ9Y520 2896 aaKnown RBP16.03■□□□□ 0.16
COL9A3-205ENST00000466192 FRYQ5TBA9 3013 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 IGKV3D-15A0A087WSY6 115 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 CDK10Q15131 360 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 RNFT1Q5M7Z0 435 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 ELFN2Q5R3F8 820 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 DNM1P46Q6ZS02 220 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 ADGRE4PQ86SQ3 457 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 TMEM45BQ96B21 275 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 GHITMQ9H3K2 345 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 CNTD2Q9H8S5 307 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 BEX1Q9HBH7 125 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 TMEM138Q9NPI0 162 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 ING3Q9NXR8 418 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 DLL3Q9NYJ7 618 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 FLVCR2Q9UPI3 526 aa16.03■□□□□ 0.16
COL9A3-205ENST00000466192 C7orf66A4D0T2 115 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 MEIS3P1A6NDR6 274 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 F5H5K5 113 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 RBBP9O75884 186 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 ALDOBP05062 364 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 ABOP16442 354 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 ZNF20P17024 532 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 TNFSF10P50591 281 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 SLC10A1Q14973 349 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 C3AR1Q16581 482 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 PCGF3Q3KNV8 242 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 C1orf100Q5SVJ3 147 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 RIPPLY2Q5TAB7 128 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 NOXA1Q86UR1 476 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 TCTE3Q8IZS6 198 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 FDCSPQ8NFU4 85 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 OR1M1Q8NGA1 313 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 FOXRED1Q96CU9 486 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-205ENST00000466192 FAM71F1Q96KD3 344 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-205ENST00000466192 MED28Q9H204 178 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms