RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 ZNF20P17024 532 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 C4BPBP20851 252 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 ADH6P28332 368 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 S100A11P31949 105 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 CX3CR1P49238 355 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 CXADRP78310 365 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 SORDQ00796 357 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 IL11RAQ14626 422 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 NHLRC3Q5JS37 347 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 LY6G6FQ5SQ64 297 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 RAB12Q6IQ22 244 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 TMUB2Q71RG4 321 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 NAA40Q86UY6 237 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 CCDC28AQ8IWP9 274 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 C12orf45Q8N5I9 185 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-217ENST00000466159 SLC25A43Q8WUT9 341 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-217ENST00000466159 CCDC107Q8WV48 283 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 IMMP1LQ96LU5 166 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 CDX2Q99626 313 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-217ENST00000466159 SELENOIQ9C0D9 397 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 ZNF230Q9UIE0 474 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-217ENST00000466159 VSIG4Q9Y279 399 aa7.91□□□□□ -1.14
SYNE1-217ENST00000466159 MYO7BQ6PIF6 2116 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 HMSDA8MTL9 139 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 I3L521 148 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 CRYZL1O95825 349 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 PDGFAP04085 211 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 KLK3P07288 261 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-217ENST00000466159 SLC35A1P78382 337 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 DHRS2Q13268 280 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 SGCAQ16586 387 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 PHYHD1Q5SRE7 291 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 FAM57BQ71RH2 274 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 ZNF101Q8IZC7 436 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 OR5AS1Q8N127 324 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 TMEM104Q8NE00 496 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 SUN5Q8TC36 379 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 MRGPRFQ96AM1 343 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 ZBTB8AQ96BR9 441 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 JSRP1Q96MG2 331 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-217ENST00000466159 EDEM2Q9BV94 578 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 ZNF416Q9BWM5 594 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 ARL6Q9H0F7 186 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 PROK2Q9HC23 129 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 HS3ST3B1Q9Y662 390 aa7.9□□□□□ -1.14
SYNE1-217ENST00000466159 CCDC163A0A0D9SF12 145 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 A0A1W2PP11 408 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 OR6C65A6NJZ3 312 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 TMEM14DPA8MWL7 114 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 RRASP10301 218 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 PPP3CBP16298 524 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 OR3A4PP47883 348 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 CAPZA1P52907 286 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 H3F3AP84243 136 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 MPPED2Q15777 294 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 ZNF239Q16600 458 aaKnown RBP7.9□□□□□ -1.15
SYNE1-217ENST00000466159 RNASE10Q5GAN6 216 aaKnown RBP7.9□□□□□ -1.15
SYNE1-217ENST00000466159 GLIPR1L1Q6UWM5 242 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 ALKAL2Q6UX46 152 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 RHOUQ7L0Q8 258 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 HDDC2Q7Z4H3 204 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 GTPBP8Q8N3Z3 284 aaPredicted RBP7.9□□□□□ -1.15
SYNE1-217ENST00000466159 ZNF283Q8N7M2 679 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 STEAP2Q8NFT2 490 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 ZNF385AQ96PM9 386 aaKnown RBP7.9□□□□□ -1.15
SYNE1-217ENST00000466159 UCN2Q96RP3 112 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 MOB1AQ9H8S9 216 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 KCNN3Q9UGI6 736 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 ZNF107Q9UII5 783 aaPredicted RBP7.9□□□□□ -1.15
SYNE1-217ENST00000466159 NXT1Q9UKK6 140 aaKnown RBP7.9□□□□□ -1.15
SYNE1-217ENST00000466159 KCNK7Q9Y2U2 307 aa7.9□□□□□ -1.15
SYNE1-217ENST00000466159 A0A0A6YYD4 124 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 LOC102725191A0A1B0GVB3 256 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 DISC1C4P0D8 188 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 SSX5O60225 188 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 WDPCPO95876 746 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 HRH1P35367 487 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 AP2S1P53680 142 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-217ENST00000466159 KCNMB1Q16558 191 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 AANATQ16613 207 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 RAET1LQ5VY80 246 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 OPN5Q6U736 354 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 AGBL5Q8NDL9 886 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 OR10R2Q8NGX6 335 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 C1orf147Q96MC9 270 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-217ENST00000466159 ZNF700Q9H0M5 742 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 BANF2Q9H503 90 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 MRPS28Q9Y2Q9 187 aaKnown RBP7.89□□□□□ -1.15
SYNE1-217ENST00000466159 TRAV14DV4A0A0A6YYC5 116 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 POM121CA8CG34 1229 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 SOCS1O15524 211 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 TLX3O43711 291 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-217ENST00000466159 ZIC3O60481 467 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 RP2O75695 350 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 MPIG6BO95866 241 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 HLA-AP01891 365 aaKnown RBP7.89□□□□□ -1.15
SYNE1-217ENST00000466159 ERCC1P07992 297 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-217ENST00000466159 CYC1P08574 325 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 HCKP08631 526 aa7.89□□□□□ -1.15
SYNE1-217ENST00000466159 HOXA6P31267 233 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms