RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 GSTK1Q9Y2Q3 226 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 TIMM10BQ9Y5J6 103 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 FAM215AQ9Y5M1 114 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 CACNA1GO43497 2377 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 ARHGAP21Q5T5U3 1957 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 DOCK7Q96N67 2140 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 CACNA1AO00555 2505 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 FREM1Q5H8C1 2179 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 TRBV2A0A0J9YWF9 115 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 A0A1W2PPL8 197 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 TMEM212A6NML5 194 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 OR4C45A6NMZ5 311 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 SLC22A1O15245 554 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 AIREO43918 545 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 GPX5O75715 221 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 KRT33AO76009 404 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 UBL3O95164 117 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 GPANK1O95872 356 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 IGLV3-1P01715 115 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 RAF1P04049 648 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 SPARCP09486 303 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 H2BFMP0C1H6 154 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 TMIGD3P0DMS9 266 aaPredicted RBP4.77□□□□□ -1.65
VPS41-211ENST00000466017 CD37P11049 281 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 PSKH1P11801 424 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 ABOP16442 354 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 CELP19835 753 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 PSMB1P20618 241 aaKnown RBP4.77□□□□□ -1.65
VPS41-211ENST00000466017 CDAP32320 146 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 ARR3P36575 388 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 CD79BP40259 229 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 ARF1P84077 181 aaKnown RBP4.77□□□□□ -1.65
VPS41-211ENST00000466017 TSTQ16762 297 aaKnown RBP4.77□□□□□ -1.65
VPS41-211ENST00000466017 RSPO1Q2MKA7 263 aaPredicted RBP4.77□□□□□ -1.65
VPS41-211ENST00000466017 ZNF829Q3KNS6 432 aaPredicted RBP4.77□□□□□ -1.65
VPS41-211ENST00000466017 C3orf36Q3SXR2 165 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 SLC36A2Q495M3 483 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 TP53I3Q53FA7 332 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 CCDC92Q53HC0 331 aaPredicted RBP4.77□□□□□ -1.65
VPS41-211ENST00000466017 YIF1BQ5BJH7 314 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 ELFN2Q5R3F8 820 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 TMEM244Q5VVB8 128 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 GPR107Q5VW38 600 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 GFRALQ6UXV0 394 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 ZNF813Q6ZN06 617 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 ZNF704Q6ZNC4 412 aaPredicted RBP4.77□□□□□ -1.65
VPS41-211ENST00000466017 SLC16A12Q6ZSM3 486 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 KRT74Q7RTS7 529 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 SLC16A14Q7RTX9 510 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 PRSS45Q7RTY3 260 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 FAM220AQ7Z4H9 259 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 CATSPERDQ86XM0 798 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 ZGRF1Q86YA3 2104 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 KLBQ86Z14 1044 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.77□□□□□ -1.65
VPS41-211ENST00000466017 SKA3Q8IX90 412 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 C1orf174Q8IYL3 243 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 ELMOD2Q8IZ81 293 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 GABRG1Q8N1C3 465 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 YIPF7Q8N8F6 280 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 IL17RDQ8NFM7 739 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 OR10S1Q8NGN2 331 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 OR5M9Q8NGP3 310 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 OR1K1Q8NGR3 316 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 OR2G2Q8NGZ5 317 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 C12orf43Q96C57 262 aaKnown RBP4.77□□□□□ -1.65
VPS41-211ENST00000466017 ISOC1Q96CN7 298 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 C10orf35Q96D05 121 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 ZNF75AQ96N20 296 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 DMRTA2Q96SC8 542 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 TBX5Q99593 518 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 MED18Q9BUE0 208 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 HDHD2Q9H0R4 259 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 MOB1AQ9H8S9 216 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 B3GNT2Q9NY97 397 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 ELOVL5Q9NYP7 299 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 JKAMPQ9P055 326 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 ZNF391Q9UJN7 358 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 CLEC4AQ9UMR7 237 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 STUB1Q9UNE7 303 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 PROCRQ9UNN8 238 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 KLHDC2Q9Y2U9 406 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 SIRT4Q9Y6E7 314 aaPredicted RBP4.77□□□□□ -1.65
VPS41-211ENST00000466017 R4GMQ9 66 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 A3GALT2U3KPV4 340 aa4.77□□□□□ -1.65
VPS41-211ENST00000466017 SPTBN4Q9H254 2564 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 TRAV1-2A0A0B4J238 106 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 TRBV5-5A0A0J9YX44 114 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 A0A0U1RQV5 110 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 LOC390937A0A1W2PQ73 354 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 OR6C6A6NF89 314 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 ANKRD61A6NGH8 418 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 A8MXE2 369 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 PRR32B1ATL7 298 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 E9PI62 339 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 H3BMQ9 156 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 RER1O15258 196 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 SGCEO43556 437 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 SYNGR3O43761 229 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 SLC19A2O60779 497 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms