RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 RAMP1O60894 148 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 CD2P06729 351 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 OCM2P0CE71 109 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 UBCP0CG48 685 aaKnown RBP12.08□□□□□ -0.48
HDAC6-215ENST00000465457 SRMP19623 302 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 CTSSP25774 331 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 APEX1P27695 318 aaKnown RBP12.08□□□□□ -0.48
HDAC6-215ENST00000465457 TALDO1P37837 337 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 EIF1AXP47813 144 aaKnown RBP12.08□□□□□ -0.48
HDAC6-215ENST00000465457 MMP16P51512 607 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 CLDN20P56880 219 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 STK11Q15831 433 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 WDR38Q5JTN6 314 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-215ENST00000465457 CATSPERDQ86XM0 798 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 C20orf196Q8IYI0 205 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 MBD3L2Q8NHZ7 208 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-215ENST00000465457 SETD6Q8TBK2 473 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 TMEM158Q8WZ71 300 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 TMEM45BQ96B21 275 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 SLAMF6Q96DU3 332 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 PIK3IP1Q96FE7 263 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 DIRAS2Q96HU8 199 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 AMELYQ99218 206 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 GSX2Q9BZM3 304 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 PRDM14Q9GZV8 571 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 TCF7L1Q9HCS4 588 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 POLE4Q9NR33 117 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 EMC3Q9P0I2 261 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 CAMK2AQ9UQM7 478 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 V9GYH0 126 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 IGKV3D-15A0A087WSY6 115 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 TRBV5-7A0A0A0MS05 114 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 IGKV1D-43A0A0B4J1Z2 117 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 FABP12A6NFH5 140 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 CXCL13O43927 109 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 MPZL1O95297 269 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 SYNGR4O95473 234 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 ISG15P05161 165 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 PSKH1P11801 424 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 NPR2P20594 1047 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 MSR1P21757 451 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 ACHEP22303 614 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 RPS27P42677 84 aaKnown RBP12.07□□□□□ -0.48
HDAC6-215ENST00000465457 RANBP1P43487 201 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 SCAND1P57086 179 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 GRB2P62993 217 aaKnown RBP12.07□□□□□ -0.48
HDAC6-215ENST00000465457 SRSF2Q01130 221 aaKnown RBP12.07□□□□□ -0.48
HDAC6-215ENST00000465457 TNK1Q13470 666 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 RIN1Q13671 783 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 TRIM16LQ309B1 348 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 KRTAP24-1Q3LI83 254 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 IDNKQ5T6J7 187 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 CARD17Q5XLA6 110 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 OR7E24Q6IFN5 339 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 FAM131AQ6UXB0 335 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 BAIAP2L2Q6UXY1 529 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 Q6ZNX1 250 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 BTLAQ7Z6A9 289 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 UBQLNLQ8IYU4 475 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 OR13C5Q8NGS8 318 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 IGFBPL1Q8WX77 278 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 HSD17B8Q92506 261 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 RGP1Q92546 391 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-215ENST00000465457 FOXN4Q96NZ1 517 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 UCN2Q96RP3 112 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 WACQ9BTA9 647 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 ULBP2Q9BZM5 246 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 PPIL3Q9H2H8 161 aaKnown RBP12.07□□□□□ -0.48
HDAC6-215ENST00000465457 MIXL1Q9H2W2 232 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 NELFAQ9H3P2 528 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 SEC61A2Q9H9S3 476 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 NOX4Q9NPH5 578 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 TBCCD1Q9NVR7 557 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 COMMD3Q9UBI1 195 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 CKLFQ9UBR5 152 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 DAPK2Q9UIK4 370 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 ING1Q9UK53 422 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-215ENST00000465457 MCTS1Q9ULC4 181 aaKnown RBP12.07□□□□□ -0.48
HDAC6-215ENST00000465457 FLVCR1Q9Y5Y0 555 aa12.07□□□□□ -0.48
HDAC6-215ENST00000465457 A0A0G2JK05 382 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 ACOD1A6NK06 481 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 ZNF716A6NP11 495 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 DHHO43323 396 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 SRSF10O75494 262 aaKnown RBP12.06□□□□□ -0.48
HDAC6-215ENST00000465457 PTTG1O95997 202 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 APOC1P02654 83 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 TMIGD3P0DMS9 266 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-215ENST00000465457 ZNF708P17019 499 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 CFPP27918 469 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 LOXP28300 417 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-215ENST00000465457 CCKARP32238 428 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 OPRM1P35372 400 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 KIR3DL2P43630 455 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 LHX2P50458 406 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 CLDN15P56746 228 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 PSMA6P60900 246 aaKnown RBP12.06□□□□□ -0.48
HDAC6-215ENST00000465457 MRPS34P82930 218 aaKnown RBP12.06□□□□□ -0.48
HDAC6-215ENST00000465457 FAM27D1Q5T7N8 215 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 BCL2L15Q5TBC7 163 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms