RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 HSD11B1P28845 292 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 SRP14P37108 136 aaKnown RBP13.7□□□□□ -0.22
COL1A1-202ENST00000463440 DAPP51397 102 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 RAD23AP54725 363 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 PRSS12P56730 875 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 RPS7P62081 194 aaKnown RBP13.7□□□□□ -0.22
COL1A1-202ENST00000463440 ESRRGP62508 458 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 SNAPC1Q16533 368 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 SLC35D3Q5M8T2 416 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 TMEM236Q5W0B7 351 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 RHOUQ7L0Q8 258 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 RNF133Q8WVZ7 376 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 DUS3LQ96G46 650 aaKnown RBP13.7□□□□□ -0.22
COL1A1-202ENST00000463440 REPIN1Q9BWE0 567 aaKnown RBP13.7□□□□□ -0.22
COL1A1-202ENST00000463440 SLC22A4Q9H015 551 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 OPA3Q9H6K4 179 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 GCM1Q9NP62 436 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 DCAF16Q9NXF7 216 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 TVP23BQ9NYZ1 205 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 UBAP1Q9NZ09 502 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 PCDHB10Q9UN67 800 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 N6AMT1Q9Y5N5 214 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 CD300LBA8K4G0 201 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 F5H5P2 479 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 PLPP2O43688 288 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 HLA-DPB1P04440 258 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 SLC2A1P11166 492 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 THBS2P35442 1172 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 CX3CR1P49238 355 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 MMP16P51512 607 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 BTG1P62324 171 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 ZNF92Q03936 586 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 TMEM155Q4W5P6 130 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 GLYATL3Q5SZD4 288 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 ZNF771Q7L3S4 317 aaPredicted RBP13.69□□□□□ -0.22
COL1A1-202ENST00000463440 CXXC5Q7LFL8 322 aaKnown RBP13.69□□□□□ -0.22
COL1A1-202ENST00000463440 ZDHHC13Q8IUH4 622 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 KLHL36Q8N4N3 616 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 SPICQ8N5J4 248 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 ZNF454Q8N9F8 522 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 OR2AE1Q8NHA4 323 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 PRRG3Q9BZD7 231 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 KRT84Q9NSB2 600 aa13.69□□□□□ -0.22
COL1A1-202ENST00000463440 LRRC30A6NM36 301 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 TMEM178BH3BS89 294 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 TBX1O43435 398 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 SELENOFO60613 162 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 ANXA2P07355 339 aaKnown RBP13.68□□□□□ -0.22
COL1A1-202ENST00000463440 LYNP07948 512 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 H2BFMP0C1H6 154 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 PTGES3Q15185 160 aaKnown RBP13.68□□□□□ -0.22
COL1A1-202ENST00000463440 OR8G1Q15617 311 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 CCDC121Q6ZUS5 278 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 MOGAT3Q86VF5 341 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 LRRC28Q86X40 367 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-202ENST00000463440 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-202ENST00000463440 C1orf87Q8N0U7 546 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 CELF2-AS1Q8N7Q2 184 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 OTOSQ8NHW6 89 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 THEM6Q8WUY1 208 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 SIGLEC11Q96RL6 698 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 MDFIQ99750 246 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 ENOPH1Q9UHY7 261 aa13.68□□□□□ -0.22
COL1A1-202ENST00000463440 ATRQ13535 2644 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 A0A0G2JMP0 313 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 IGHV3-64DA0A0J9YX35 117 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 A0A0X1KG70 313 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 C5orf63A6NC05 138 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 GMDSO60547 372 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 PNPP00491 289 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 SLC2A5P22732 501 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 CA6P23280 308 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 MDH2P40926 338 aaKnown RBP13.67□□□□□ -0.22
COL1A1-202ENST00000463440 OPRL1P41146 370 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 CD200P41217 278 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 GATA4P43694 442 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 HNRNPA0Q13151 305 aaKnown RBP13.67□□□□□ -0.22
COL1A1-202ENST00000463440 APOFQ13790 326 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 ZMYND11Q15326 602 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 TIGD6Q17RP2 521 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 ZNF181Q2M3W8 571 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 LCN1P1Q5VSP4 162 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 FAHD2BQ6P2I3 314 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-202ENST00000463440 ASRGL1Q7L266 308 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 AMIGO2Q86SJ2 522 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 MUC20Q8N307 709 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-202ENST00000463440 TEX29Q8N6K0 151 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 BBS1Q8NFJ9 593 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 OR4M2Q8NGB6 313 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 OR52H1Q8NGJ2 320 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 ZNF420Q8TAQ5 688 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-202ENST00000463440 LRTOMTQ8WZ04 291 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 ERGIC1Q969X5 290 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 SPSB4Q96A44 273 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 FAHD2AQ96GK7 314 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 AMELYQ99218 206 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 GABARAPL1Q9H0R8 117 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 DNAJC27Q9NZQ0 273 aa13.67□□□□□ -0.22
COL1A1-202ENST00000463440 MRPL15Q9P015 296 aaKnown RBP13.67□□□□□ -0.22
COL1A1-202ENST00000463440 CYB5R3P00387 301 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms