RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 IGHV4-34P06331 123 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 CD3GP09693 182 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 ZDHHC11BP0C7U3 371 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 ZNF17P17021 662 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 BGNP21810 368 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 GNRHRP30968 328 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 CD70P32970 193 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 PFN2P35080 140 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 PPICP45877 212 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 KCNJ3P48549 501 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 TAS2R39P59534 338 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 RPL31P62899 125 aaKnown RBP2.76□□□□□ -1.97
USH2A-203ENST00000463147 SLC35B1P78383 322 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 HMGCS1Q01581 520 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 GTF3C1Q12789 2109 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 DYNC1I2Q13409 638 aaKnown RBP2.76□□□□□ -1.97
USH2A-203ENST00000463147 TFDP2Q14188 446 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 TAL2Q16559 108 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 METTL21CQ5VZV1 264 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 ARL9Q6T311 187 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 CD300LGQ6UXG3 332 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 ABHD13Q7L211 337 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 RAB43Q86YS6 212 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 SLC34A3Q8N130 599 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 DAW1Q8N136 415 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 FAM71E2Q8N5Q1 922 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 OR51A7Q8NH64 312 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 LGALS14Q8TCE9 139 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 SEH1LQ96EE3 360 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 GALNT14Q96FL9 552 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 IMMP1LQ96LU5 166 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 GPR21Q99679 349 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 HDHD3Q9BSH5 251 aaPredicted RBP2.76□□□□□ -1.97
USH2A-203ENST00000463147 CHAC1Q9BUX1 264 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 ZDHHC4Q9NPG8 344 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 RMND1Q9NWS8 449 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 CES1P1Q9UKY3 287 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 AQRO60306 1485 aaKnown RBP eCLIP2.76□□□□□ -1.97
USH2A-203ENST00000463147 MTCL1Q9Y4B5 1905 aaKnown RBP2.76□□□□□ -1.97
USH2A-203ENST00000463147 ASTN1O14525 1302 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 MN1Q10571 1320 aaPredicted RBP2.75□□□□□ -1.97
USH2A-203ENST00000463147 SMIM26A0A096LP01 95 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 MGAT4DA6NG13 374 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 PRMT5O14744 637 aaPredicted RBP2.75□□□□□ -1.97
USH2A-203ENST00000463147 CTNSO60931 367 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 LY6G6DO95868 133 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 CST4P01036 141 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 LIPCP11150 499 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 ERGP11308 486 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 NQO2P16083 231 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 OMGP23515 440 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 IL12BP29460 328 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 HCCSP53701 268 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 OR2B6P58173 313 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 OR2B8PP59922 312 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 RPL18AQ02543 176 aaKnown RBP2.75□□□□□ -1.97
USH2A-203ENST00000463147 C2orf80Q0P641 193 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 SMARCB1Q12824 385 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 PSG7Q13046 419 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 QPRTQ15274 297 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 TFDP3Q5H9I0 405 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 TMEM255AQ5JRV8 349 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 DUPD1Q68J44 220 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 RWDD4Q6NW29 188 aaKnown RBP2.75□□□□□ -1.97
USH2A-203ENST00000463147 TMEM205Q6UW68 189 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 H2AFVQ71UI9 128 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 FAM19A1Q7Z5A9 133 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 CDRT4Q8N9R6 151 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 CYB561A3Q8NBI2 242 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 FAM19A4Q96LR4 140 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 ZNF75AQ96N20 296 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 NRTNQ99748 197 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 LZTS2Q9BRK4 669 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 SPNS1Q9H2V7 528 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 C1orf198Q9H425 327 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 NECAP2Q9NVZ3 263 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 UVRAGQ9P2Y5 699 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 CD84Q9UIB8 345 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 KLF12Q9Y4X4 402 aa2.75□□□□□ -1.97
USH2A-203ENST00000463147 C2orf16Q68DN1 1984 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 MAP3K15Q6ZN16 1313 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 TMEM131Q92545 1883 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 TRAV8-7A0A075B6U6 113 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 ANKRD20A5PA0PJZ0 165 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 DFFAO00273 331 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 ACTL6AO96019 429 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 GCGP01275 180 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 CTSLP07711 333 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 TLX1NBP0CAT3 122 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 PRPS2P11908 318 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 GFAPP14136 432 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 LOXP28300 417 aaPredicted RBP2.74□□□□□ -1.97
USH2A-203ENST00000463147 GGT2P36268 569 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 POLR2IP36954 125 aaKnown RBP2.74□□□□□ -1.97
USH2A-203ENST00000463147 RPS10P46783 165 aaKnown RBP2.74□□□□□ -1.97
USH2A-203ENST00000463147 GALR1P47211 349 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 HCAR3P49019 387 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 PRLHRP49683 370 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 CCR6P51684 374 aa2.74□□□□□ -1.97
USH2A-203ENST00000463147 AP1S2P56377 157 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms